KEGG   Aegilops tauschii (wheat D): 109777367
Entry
109777367         CDS       T04345                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109777367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109777367
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109777367
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     109777367
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 109777367
NCBI-ProteinID: XP_020191599
UniProt: A0A453FLI4
LinkDB
Position
3:427962733..427968874
AA seq 809 aa
MPGAEADGGAGAGASSSSTADSFDAGQYAFFGKEPRDGLELGCLEADGGHGNGGGFSGPE
DGGLYRLSSVGEEIDNLSNLSDVDDLASTFAKLNRTVSGGTRNPGVIGDRRSISRGSSLT
VDWTEDVEFPNYQDILENEEFQEGKRWWSSQSHSLMQQGDNKPLSRTSSYPQQPLQHRSS
EPITGPKSPPLTSFPPPGGRSPHPAQGLTRHGSIPSFGAGIQMGSPSMPLPGSPYHMVGL
PHGLPYGGSMPFGGPNMHVSNPMQNDWSNQANLFTGEHLNLLPNLLQKQISLPNSPMSSL
LFSQQQQRLAQLQPSHHHNYLNLPPHLFYHHHPPEIPGRFESATSLPSSRDKRSRSGRGK
HSLRFSQPPSDTTGSQNGESGGLKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQA
CMAKKGSSSKQKTNFSPTSVKDLPSKSRSSGDQHAYLQVDALGRVSFSSIRRPRSLLEVD
NPLSGEGPHDQKSSVRSLEKEPMVAARVTVEDAIGLLLEVDDIDRLLQSSQAQENSFQLR
RRRQVLLEGLAASLQLADPLGPSKSANSSGLAPKDDIVFLRIVSLPKGRKLLARYIRLIV
PGSELTRIVCMAIFRHLRFLFGGLPSDSSAAETTVALAKTVSTCAHHMELGALSACLAAV
VCSSEQPPLRPLGSSAGDGASLIIKSVLDRATELLTDQRAVSSYTPSNRALWQASFDAFF
GLLTKYCLSKYESILQMFVMQASGSVIGSEASQATSREMPVELLRASLPHTNEQQRQMLL
DFAQRTTPASSFNPTGASGGHISSESVPG
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgccgggcgctgaggccgacggcggcgccggcgccggcgcttcctcctcctccaccgca
gatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgcgacgggctcgag
ctaggttgcttggaggctgatggtggccatggcaatggcggtggattcagcgggccagag
gatggtggcttgtaccggctctcttcggtgggagaagagattgacaatctaagtaacttg
tcggacgtcgatgatcttgcgagtacttttgctaagttgaaccgaaccgttagtggtgga
acacggaatcctggtgttatcggtgacagacgatccatttcaagaggaagttctttaact
gttgattggactgaggatgtcgagtttcccaattatcaggatatattagaaaatgaggaa
ttccaggaaggtaaaagatggtggtcatcgcagtcacattctttgatgcagcaaggggac
aacaagccgttaagtcgaacatcttcctatcctcagcagccactgcagcaccgttccagt
gaacctatcacaggaccaaagtctcctccgttaacctcgtttccgccaccaggtggtaga
tcaccacatcctgctcaaggtcttacacgtcatgggagcattccatcgtttggagctggg
atacagatgggttctccgagcatgccactgccaggttccccgtatcatatggttgggtta
cctcatggactaccatatggtggaagcatgccctttggtggtcctaatatgcatgtaagc
aatccaatgcaaaatgactggtcaaaccaagccaacctgttcactggggagcaccttaat
ctactgccaaacttgttacagaaacaaatatcgcttccgaatagcccaatgtcatcactg
ctattctctcagcaacagcagagattggcacagctccaaccatcccaccatcataattac
ctaaatttaccaccccacctattctaccatcatcaccccccagagataccaggcaggttt
gaatctgctaccagtcttccttcatcaagagacaagagatcaagatcaggaaggggaaaa
cacagtttacgtttttctcaaccaccatctgatactactggtagtcagaacggtgagagt
ggtggactgaagtttagatccaagtacatgtcatctgaagagattgagtctattctaaga
atgcagcactcggcaagtcacagcagtgatccttacgttgttgattattatcatcaagct
tgcatggcgaaaaagggttccagttctaagcaaaagaccaatttctccccaacatcagtt
aaagacttgccctccaagtccagatcaagtggtgaccagcatgcatatcttcaggtcgat
gctcttgggagagtttctttctcttccattcgcaggccccggtctcttcttgaagttgac
aatcctttgtcaggtgagggtcctcatgatcagaagtcttccgtgaggtccctggagaaa
gaacctatggtagcagccagggtcactgttgaagatgccattggtcttcttcttgaggtg
gatgatattgacaggctcctgcagtctagccaggcacaggagaacagcttccagctgagg
cgaaggcgacaagttctccttgaaggtctagccgcgtcacttcagcttgctgaccctctt
gggcccagcaaatctgccaattcatctggtttagcccctaaggatgatattgtctttctt
cgcattgtttctcttcccaaaggacgtaagcttctggctcgttatatccggcttattgtc
cctggaagcgagttgaccaggattgtgtgcatggctattttccgacacctgaggttcttg
tttgggggtttaccatcagattcaagtgcagcagagacaacagttgctctggcaaagact
gtttcgacttgtgctcaccatatggagctcggtgctcttagtgcttgccttgctgcagtt
gtctgttcatctgagcaaccacctctccgtcctcttggtagctctgctggtgacggggct
tctcttattatcaagtcagtactggaccgagcaactgagttgctgactgatcagcgtgcc
gtatccagctataccccgtcaaaccgagctctctggcaggcatcgtttgatgctttcttt
gggcttctgacaaaatactgcctcagtaagtatgaaagtattctgcagatgtttgtgatg
caggcatcaggctctgtgattggatctgaagcctcccaagcaaccagcagggagatgcca
gtagagttgctacgtgcaagcctcccccacacaaacgagcagcaacgccagatgctgctt
gatttcgctcagagaaccacgcctgccagcagttttaatcccactggtgctagcggtgga
cacatctcttctgaatcggttcctggttaa

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