Aegilops tauschii (wheat D): 109777890
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Entry
109777890 CDS
T04345
Name
(RefSeq) DNA excision repair protein CSB
KO
K10841
DNA excision repair protein ERCC-6
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109777890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ats03036
]
109777890
03400 DNA repair and recombination proteins [BR:
ats03400
]
109777890
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109777890
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109777890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
109777890
NCBI-ProteinID:
XP_073366056
LinkDB
All DBs
Position
3:complement(43308352..43313581)
Genome browser
AA seq
1221 aa
AA seq
DB search
MAEEDDDQRLLHSLGVTSANIDDIERKILSQAKTDPKKGDAETPGPTATGDQESSLTTPQ
DDAQAKLHQKLRSVQLEIDAVASTLGGAKQAAGKKSGGGGSGSADAEDNKKKKKEKVKEE
ENADEDAPRGGALQQALAAERLRSLKRAKVQIQREILQSGPGPSGSGNQKDKMLAMLVED
EPRRKKSLKPPGGPKKKSPTRRLKTVTYDDDDDFDTVLDGASAGFMETEREELIRKGLLT
PFHKLKGFEKRVERPGTSSRQNGSAEQAEETIEASSIAKVAQAMQNMAQSRPTTKLLDAE
FLPKLEAPTAPFQRLGVPLKRPGLPSSDERKNKRLKSKTKRPLPGKKWMKANSKKETLLD
VADEDVGDAAASASVSENEDEVIEGSDGLPPVILEGGLRIPGSVYTQLFDYQKVGVQWLW
ELHCQRAGGIIGDEMGLGKTVQVLSFLGALHDSGMYKPSIVICPVTLLQQWRREASKWYP
KFKVEILHDSANSSSKKGKRYSDSESDVSWDSDQEEVTRMKPAQKWDDLISRVVNSGSGL
LLTTYEQLRIIREKLLDVEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQN
KLSELWSLFDFVFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMP
YLLRRMKADVNAQLPKKTEQVLFCSLTQEQRATYRAFLASSEVEQIFDGNRNSLYGIDVL
RKICNHPDLLEREQAAQNPDYGNIERSGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDIL
ENFLTARDYQYRRMDGLTPPKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVII
FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQ
QRRFFKARDMKDLFTLQDDDKNGSTETSNIFGQLSEDVNIGAPDGEERGERPSALPTSAE
AEPSVDGDGKSDLRSDQADEESNILKSLFDGQGVHSAINHDAIMSANDDQKLRLEAEASQ
VAQRAAEALRQSRMLRSRDDFAVPTWTGRAGAAGAPTSVRRKFGSTLNTQLVSSSQPSEG
SSSSSRVQSLQVGALHGKALSSAELLAKMCGTREGAASDALEHQLSLGSTSNQRPGSTEN
GRTSNSSSSRNMIVQPEVLIRQLCTFIQQNGGSASSTSLTEHFKNRIQPKDMLVFKNLLK
EIATLQRGAGGATWVLKPEYG
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggacgacgaccagcgcctgctgcacagcctcggcgtcacctccgccaac
atcgacgacatcgagaggaagatcctgtcgcaggcgaaaaccgacccgaagaagggcgac
gccgagacgccggggccgaccgccaccggtgaccaggagagtagcctgacaacgcctcaa
gatgatgctcaggccaaactgcaccagaaactgcgctccgtgcagcttgagatcgacgct
gtggcttccacgctcggaggggctaaacaagctgctggaaagaaaagcggcggcggtggc
tcgggtagcgctgatgctgaggataataagaagaagaagaaggagaaggtgaaggaggag
gagaatgctgatgaagacgcccctcgtggaggagccctccagcaggcgcttgccgctgag
cggctcaggagcctcaagagggctaaggtgcagattcagcgagagatattgcagtcggga
cctggcccgtccgggtcgggcaaccaaaaagacaagatgctggcaatgctggtcgaagac
gagccgaggcggaagaagtcactgaagccgcctggtgggcctaagaagaagtcgccgacg
cgtcggttgaaaaccgtcacctacgatgatgacgacgacttcgacacagtgctcgatgga
gcttctgcggggttcatggagactgaaagggaagagctgataaggaagggtttgctgaca
ccgtttcacaagttgaagggctttgagaagcgcgttgaacgccctggaacttctagcagg
caaaatggctctgcagaacaagccgaggaaaccattgaagcttccagcattgctaaagtt
gctcaggcaatgcagaacatggcacaaagccgcccaactaccaaattgcttgatgcggag
ttcttgcctaagctggaagcaccgactgctccgtttcaaaggcttggagtacctctaaaa
cgccctggccttcccagttcagatgagcggaaaaacaaaaggctaaagagtaagaccaag
agaccgttgcctggcaagaaatggatgaaagccaattcaaagaaggagacattattggat
gttgcagatgaggatgtgggagatgcagccgcatcagcttctgtgtctgagaatgaagat
gaggtaatagaaggttctgatgggttacctccagtcatccttgaaggtggtttaagaatt
cctggctcagtttacacacagctgtttgactaccaaaaagtgggagtgcagtggttatgg
gagttacattgtcaaagggctggtggaataattggcgatgaaatgggcttaggaaagacc
gtgcaggtcttatcatttcttggtgctttgcatgacagtggtatgtacaagcctagtatt
gttatctgtcctgtgacccttttgcaacagtggcgaagggaggccagtaagtggtatcca
aaattcaaagttgagatcttacatgattctgcaaacagttcaagtaaaaagggcaagaga
tacagtgattctgagagtgatgtttcttgggatagcgaccaggaagaggttacacgtatg
aagcctgcacaaaagtgggatgacttgatttcacgtgttgtaaattcagggtcaggtttg
cttctgactacatacgagcagctaagaatcatacgggagaagttgcttgatgtagaatgg
ggatatgctgtattggatgagggtcaccgcataaggaatcctaatgccgaagtaactctc
gtgtgcaagcaattgcagactgtgcacaggataattatgacaggggcgcctatccagaat
aaactttcggaactgtggtctctctttgattttgtgttccctgggaaattaggagtcctt
ccagtgtttgagaccgagttctcagttccaattactgtcggtgggtatgctaatgcaaca
ccattgcaagtgtccacagcgtacagatgtgctgttgtcctgcgtgacttgatcatgcca
tatcttcttaggagaatgaaagctgatgtcaatgcacagcttcccaagaaaacagagcag
gttcttttctgtagtttaactcaagagcaacgtgctacttatcgtgcattccttgctagt
tcagaggtggagcaaatatttgatggtaacagaaactccctttacgggatagatgtccta
aggaagatatgtaatcatcctgatcttcttgagagagaacaagccgctcagaatcctgac
tatgggaatattgaaagaagtgggaagatgaaagtggttgagcaagtacttaaagtctgg
aaagatcaaggccatcgtgttcttctttttgctcagacccaacagatgcttgacattttg
gaaaacttcttgactgcccgcgactaccaatatcgtagaatggatggacttacacctcca
aagcaaagaatggcactcattgatgagttcaataatacagatgaaattttcattttcatt
ctgacaacaaaagttggtggattgggtacgaatttgactggtgcaaacagggttataata
ttcgatcctgactggaacccttcgacagacatgcaggccagggaacgagcatggcgaatt
gggcaaaaaagagatgtgacagtttacaggttgatcacacgtgggacgatagaggagaaa
gtctaccatcgacagatatacaagcattttctcacaaacaaagtactgaaaaaccctcag
caaaggaggttctttaaagccagagacatgaaagatttattcacattgcaagatgatgac
aagaatggttcaactgaaacatcaaacatttttggccaactgtctgaagatgtgaacatc
ggtgctccagatggcgaggagcgaggcgagcgaccttcagctttaccgaccagcgcagag
gctgaaccatctgttgatggagatgggaaatcagaccttagatctgaccaagcggatgaa
gaatccaacattttgaagagtctttttgatggccagggcgttcatagtgctataaatcat
gatgccataatgagtgctaacgacgatcagaagctgcggctagaagcagaggcttcacag
gtggcacaaagggcagccgaggctttacgccaatcacggatgctcagaagccgtgatgat
tttgctgttcccacatggacaggaagagctggtgctgccggggcaccgacctctgtccgc
aggaaatttgggtcaacactcaacacccagctggtcagttcttcgcagccatcagaaggt
tcaagcagcagcagcagggttcaaagtcttcaggtgggcgctctacatggcaaagcactg
tcctccgccgagcttttggctaagatgtgtggaacgcgagagggggcagcttcagatgca
ctggaacatcaactcagcctgggctccacttccaaccagagaccaggctcgacagagaac
ggacgcacatctaactcttcttctagcaggaacatgattgtgcagcctgaggtcctgatc
cgccagttgtgcaccttcatacaacagaatggtggctccgccagctcgacgagcttgacg
gaacatttcaagaaccgcatacagcccaaggatatgctggtgttcaagaacctgctgaag
gagatagcaaccttgcaaaggggcgcaggcggcgcgacgtgggtgctgaaacccgagtac
gggtaa
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