Aegilops tauschii (wheat D): 109777920
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Entry
109777920 CDS
T04345
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Module
ats_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109777920
Enzymes [BR:
ats01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109777920
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
109777920
NCBI-ProteinID:
XP_020192072
UniProt:
A0A453DR17
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Position
3D:complement(7576137..7578734)
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AA seq
440 aa
AA seq
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MALRARTPHLLAALAGAVALLLPGAVEARVLLSLDDFGAVGDGIANDTQAFVDAWKAACA
TGGTTYLNVPAGKSYQIWPVTLAGPCRGEIKLMISGNIIAPEEPEDWSDGDQGRWLHFWG
VGDLSLSGGGIVDGRGQQWWAGSCEDENCTSYRPYEVAPMALHFEDCRDVSVKGITVQNS
QRQHLVFTRCHDVEAYYLRVTSPEYSHGTVGVLVVSSTDVHIKHDLFSVGGDCVSIVGNS
SDIRLRAISCGPGLGISIGGLGEKQSNDRIHKIKMDNMLLSNTKNGLRIKTYENGCGFAR
KVKFAHITMRNVANPIVIDQHYSASNSNRGTPCGTPNGSAVAVEKIKYIDITGTSATERA
VTFACSDAMPCKHLYLDGVNLKTAGGGSTSAYCHQAFGKHVGDVLPVSCLGKEKEDFVQL
QAPTTGTPQGDTEDEEDDDW
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgtgcaaggacgccgcacctgctcgcggctctcgccggcgccgtggccctc
ctgctgccgggcgccgttgaggcccgcgtcctgctctcgctcgacgacttcggcgccgtc
ggggacggcattgccaacgacacccaggcgttcgtcgacgcgtggaaggcggcgtgcgcc
accggcggaaccacctacctcaacgtccccgccggcaagtcctaccagatctggcccgtc
acgctcgccggcccctgccgcggcgagatcaagctcatgatttccgggaacatcatcgcg
ccggaggaaccggaagattggtcggacggcgaccagggcaggtggctccacttctggggc
gtgggcgacctctcgctgagcggcggcggcatcgtcgacggccggggccagcaatggtgg
gcggggtcgtgcgaggacgagaactgcacctcgtaccgcccatacgaagtcgcccccatg
gcgctccacttcgaggactgccgggacgtcagcgtgaagggcatcacggtgcagaacagc
cagcgccagcacctagtcttcacccgctgccacgacgtcgaggcctactatctcagagtc
acctcgccggagtacagccacggcaccgtcggcgtcctcgtcgtcagctccaccgacgtg
cacatcaagcacgatctcttctccgtaggtggcgactgcgtgtcgatcgtgggcaactcc
tcggatatccggctgagagccatctcgtgcggacctggcctcggcatcagcattggaggt
ttgggcgagaaacaaagtaatgacaggatacacaagatcaagatggacaatatgctcctc
tccaacaccaagaacggcctacgcatcaagacctacgagaacggctgcggcttcgcgcgc
aaggtgaagttcgcgcacatcacgatgaggaacgtggccaaccctattgtcatcgaccag
cactactccgcctccaactccaaccggggaactccctgtggaaccccgaacgggagcgcg
gtggcggtggagaagatcaagtacatcgacatcaccggcacttcggcgacggagcgggcg
gtcacgttcgcgtgcagcgacgccatgccgtgcaagcacctgtatctggacggggtgaac
ctgaagacggccggcggcgggagcacgtccgcctactgccaccaggcgttcgggaagcat
gtcggggacgtcctcccggtgtcgtgcctcggcaaggagaaggaggacttcgtccagctg
caggccccgaccaccggcacgccgcaaggagacactgaagacgaagaagatgatgattgg
tga
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