Aegilops tauschii (wheat D): 109778135
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Entry
109778135 CDS
T04345
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109778135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109778135
03036 Chromosome and associated proteins [BR:
ats03036
]
109778135
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109778135
Coactivators
SAGA/TFTC/STAGA complex
109778135
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109778135
STAGA complex
109778135
TFTC complex
109778135
SAGA complex
109778135
SLIK complex
109778135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
DSE1_N
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
CFAP251_N
Beta-prop_WDR41
ASA1
Beta-prop_DCAF4
Beta-prop_IFT140_1st
PAC11
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
SHKBP1_KCTD3_C
RecX_HTH3
Cytochrom_D1
Beta-prop_ACSF4
PALB2_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
109778135
NCBI-ProteinID:
XP_020192281
UniProt:
A0A453LE44
LinkDB
All DBs
Position
5
Genome browser
AA seq
656 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLTELALQEERNRLSTTSLSDVSLSRPDNDPARYYDGYNKL
RSWAYNSLDQYKHELLRVLYPAFIHCFMDLVSEGHTLEARAFFLKFREDHELMHSRDLQK
LEGTLSPLHLEEMDLARSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEV
SAGQPSLISDDADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALSDSDRAEAES
KDADAEDNNKKKSSEGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLP
ATPVEVEQSILEDLRNRAQLNNLALPSVSFYTFLNTHNGLNCSSISNDGSMVVGGFSDSS
VKVWDMAKIGQPAKTSNSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGD
FLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDK
IQPLRIMAGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLA
MSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVK
LWDVASSTKALKMDDTKAGSTNRLRLLKALPTKSTPVYNLRFSRRNLLFASGALSL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggcttccgc
ctcaccgagctcgcgctgcaggaggagcgcaaccgcctctccaccacctccctctccgac
gtctcgctctccaggccggataacgacccagcaagatactatgatggctacaacaagcta
agatcatgggcatacaattctctggaccaatacaagcatgaattactccgtgtcctttat
ccagcgtttatccattgcttcatggatctagtgtcagaggggcatacactagaagctcgg
gcatttttccttaaatttcgggaagatcatgaactgatgcattcaagggatctccaaaag
ctggaaggcactctttctcctttgcatttggaggaaatggatctggcccgatctttaagg
gaaaataaattcagaattaaattatgtgagtattcatatgaattacttctccagtatctc
cagaaaacacaagctcttgtgatgcttggaataatcaatgaaaggataatttttgaagtg
tccgctgggcagccttcattgatctctgatgatgcggatgttgttgctctggttggaacc
agcaaggacttggcaaaacagataaatcagaaggaagtgcattgggggttgcttgaagat
tcagttgaggagcgtatggagaaagcactctcagattctgatagagctgaagcagaaagc
aaggatgcagatgcagaagataataacaagaaaaaatcctcagaaggtggaaagcagggt
ggtcctctgaacaaaaagctcaaaaaggataagcttgtaggtgcaacagggaaaaatacc
aaatccgaaacaagcatgatttctgcggcacctcgtgtgaaaccggagctaacccttcca
gcgacgcctgttgaagttgaacaatcaattcttgaggacctgcgaaaccgtgcacaattg
aataacttggcattgccatctgttagcttctacacattccttaatacacataacggatta
aactgctcatcgatctcaaacgatggatctatggttgttggtgggttctcagactcgtca
gtaaaggtttgggatatggcaaagattggtcaaccagcaaaaacatctaattcacaagga
gagaatggatcttcacaggacgagcgcttgtcatcaacatctgaggggaaaagaccgtat
acattattccaaggtcattctggaccagtttattccgctgcctttagtccatttggagat
tttctcctgtcatcatcttcagattcaacaattcggctgtggagtaccaagctgaatgcc
aatcttgtttgttacaaaggacacaattacccagtttgggatgtccaatttagtccagtc
ggccattattttgccagtgcctcgcatgacaggactgctcgaatctggtcaatggataaa
atccaacctttgcggataatggctgggcatcttgctgatgttgattgtgtgcagtggcat
gtaaactgtaactacattgccaccggctctagtgacaaaactgtaaggctatgggatgtt
caaactggtgaatgtatacgaatgttcattggtcataggagtatggtcttatcactggca
atgtctcctgatgggcgatacatggcctccggagacgaagatgggaccatcatgatgtgg
gatctctctactggtcgctgcgtttcaccactagcgggacacaactcttgtgtgtggtca
cttgctttcagctgcgagggagcattgcttgcatctggatcggctgattgcactgttaaa
ctctgggatgttgcgtccagcacaaaggccctgaagatggatgacaccaaggctggttct
acgaaccgactgaggctgctgaaagctctccctacaaaatcgactcctgtttataacttg
cggttttctcggaggaatcttttgtttgcatctggcgctctctcgctatag
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