Aegilops tauschii (wheat D): 109778135
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Entry
109778135 CDS
T04345
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109778135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109778135
03036 Chromosome and associated proteins [BR:
ats03036
]
109778135
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109778135
Coactivators
SAGA/TFTC/STAGA complex
109778135
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109778135
STAGA complex
109778135
TFTC complex
109778135
SAGA complex
109778135
SLIK complex
109778135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Cytochrom_D1
RecX_HTH3
Beta-prop_VPS8
WD40_like
Beta-prop_DCAF12
PALB2_WD40
SpoVT_C
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
109778135
NCBI-ProteinID:
XP_020192281
UniProt:
A0A453LE44
LinkDB
All DBs
Position
5:complement(430641071..430648546)
Genome browser
AA seq
656 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLTELALQEERNRLSTTSLSDVSLSRPDNDPARYYDGYNKL
RSWAYNSLDQYKHELLRVLYPAFIHCFMDLVSEGHTLEARAFFLKFREDHELMHSRDLQK
LEGTLSPLHLEEMDLARSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEV
SAGQPSLISDDADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALSDSDRAEAES
KDADAEDNNKKKSSEGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLP
ATPVEVEQSILEDLRNRAQLNNLALPSVSFYTFLNTHNGLNCSSISNDGSMVVGGFSDSS
VKVWDMAKIGQPAKTSNSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGD
FLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDK
IQPLRIMAGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLA
MSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVK
LWDVASSTKALKMDDTKAGSTNRLRLLKALPTKSTPVYNLRFSRRNLLFASGALSL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggcttccgc
ctcaccgagctcgcgctgcaggaggagcgcaaccgcctctccaccacctccctctccgac
gtctcgctctccaggccggataacgacccagcaagatactatgatggctacaacaagcta
agatcatgggcatacaattctctggaccaatacaagcatgaattactccgtgtcctttat
ccagcgtttatccattgcttcatggatctagtgtcagaggggcatacactagaagctcgg
gcatttttccttaaatttcgggaagatcatgaactgatgcattcaagggatctccaaaag
ctggaaggcactctttctcctttgcatttggaggaaatggatctggcccgatctttaagg
gaaaataaattcagaattaaattatgtgagtattcatatgaattacttctccagtatctc
cagaaaacacaagctcttgtgatgcttggaataatcaatgaaaggataatttttgaagtg
tccgctgggcagccttcattgatctctgatgatgcggatgttgttgctctggttggaacc
agcaaggacttggcaaaacagataaatcagaaggaagtgcattgggggttgcttgaagat
tcagttgaggagcgtatggagaaagcactctcagattctgatagagctgaagcagaaagc
aaggatgcagatgcagaagataataacaagaaaaaatcctcagaaggtggaaagcagggt
ggtcctctgaacaaaaagctcaaaaaggataagcttgtaggtgcaacagggaaaaatacc
aaatccgaaacaagcatgatttctgcggcacctcgtgtgaaaccggagctaacccttcca
gcgacgcctgttgaagttgaacaatcaattcttgaggacctgcgaaaccgtgcacaattg
aataacttggcattgccatctgttagcttctacacattccttaatacacataacggatta
aactgctcatcgatctcaaacgatggatctatggttgttggtgggttctcagactcgtca
gtaaaggtttgggatatggcaaagattggtcaaccagcaaaaacatctaattcacaagga
gagaatggatcttcacaggacgagcgcttgtcatcaacatctgaggggaaaagaccgtat
acattattccaaggtcattctggaccagtttattccgctgcctttagtccatttggagat
tttctcctgtcatcatcttcagattcaacaattcggctgtggagtaccaagctgaatgcc
aatcttgtttgttacaaaggacacaattacccagtttgggatgtccaatttagtccagtc
ggccattattttgccagtgcctcgcatgacaggactgctcgaatctggtcaatggataaa
atccaacctttgcggataatggctgggcatcttgctgatgttgattgtgtgcagtggcat
gtaaactgtaactacattgccaccggctctagtgacaaaactgtaaggctatgggatgtt
caaactggtgaatgtatacgaatgttcattggtcataggagtatggtcttatcactggca
atgtctcctgatgggcgatacatggcctccggagacgaagatgggaccatcatgatgtgg
gatctctctactggtcgctgcgtttcaccactagcgggacacaactcttgtgtgtggtca
cttgctttcagctgcgagggagcattgcttgcatctggatcggctgattgcactgttaaa
ctctgggatgttgcgtccagcacaaaggccctgaagatggatgacaccaaggctggttct
acgaaccgactgaggctgctgaaagctctccctacaaaatcgactcctgtttataacttg
cggttttctcggaggaatcttttgtttgcatctggcgctctctcgctatag
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