KEGG   Aegilops tauschii (wheat D): 109778761
Entry
109778761         CDS       T04345                                 
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109778761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109778761
Spliceosome [BR:ats03041]
 Complex B
  Other components
   Prp19-related factors
    109778761
 Complex C
    109778761
SSDB
Motif
Pfam: SYF2 SoxA-TsdA_cyt-c LEA_5
Other DBs
NCBI-GeneID: 109778761
NCBI-ProteinID: XP_020192927
UniProt: A0A453SJA6
LinkDB
Position
7D:complement(518842262..518845760)
AA seq 338 aa
MGKSEPECVNSSNPAHECNDYCLNKIAEAKRRLLEEQPDSWKGPPEDRTVHPDCINASNP
YHGCSEYCFKKIADANAAAERGEPEKPAGGSGKSGVAPEQADGDDHSGQQEDAATADDGY
PQMTEKQKKLFELQLKMNEARKANQQAMVAEKKSMEPRGESRGISKEKWLEDRKKKIGKL
LDSNGLDMSKSYMLDTQDMAEAKYKKWEKEPAPHGWDVFNQKTLYDAYKKRTKNIEVDMD
AYNRAKETDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKD
VDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggggaagtcagagccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgat
tactgcctcaacaagatcgccgaggccaagcgccgcctcctcgaagagcaacccgactcg
tggaagggccccccggaggaccgcaccgtgcaccctgactgcatcaacgcctccaacccc
taccatggctgctctgagtactgctttaagaagattgccgatgccaacgcagcggcggag
cgcggggagccagagaagcctgctggaggttctggcaaatcaggagtcgctccagagcag
gccgatggcgatgatcattctgggcagcaggaggacgccgccaccgcggatgacggttac
ccgcagatgaccgaaaagcagaagaagctgtttgagctgcagcttaagatgaacgaagct
aggaaggcgaatcagcaggcgatggttgcggagaagaagagtatggagcctcgtggcgag
agcagaggcatatctaaggagaagtggttggaagacaggaaaaagaagattggaaagctg
cttgattcaaatggcctggatatgtcgaagtcttacatgctggatacacaggatatggca
gaagcaaaatacaagaagtgggagaaggaacccgcaccgcatggctgggatgttttcaac
cagaaaaccttgtatgatgcatacaagaagaggaccaaaaacatagaagtcgacatggat
gcatacaatagagcgaaagaaaccgatcctgaattctaccgtgaggcttcaagtcttcaa
tatgggaaggtgtctagggtggcggaaccaaacatcgaccgaatggttaatgagctcaag
gagcgggacgagaagcgcaaggcgttcagcaggaggcgcaagttcaacgaagacaaggac
gttgactcgatcaacgaccggaacgagcacttcaacaagaagatcgagagggcctttggc
aaatacacgctcgagatcaagaacaacttggaaagagggacggccttgccagattaa

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