Aegilops tauschii (wheat D): 109778761
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Entry
109778761 CDS
T04345
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109778761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109778761
Spliceosome [BR:
ats03041
]
Complex B
Other components
Prp19-related factors
109778761
Complex C
109778761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
SoxA-TsdA_cyt-c
LEA_5
Motif
Other DBs
NCBI-GeneID:
109778761
NCBI-ProteinID:
XP_020192927
UniProt:
A0A453SJA6
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All DBs
Position
7D:complement(518842262..518845760)
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AA seq
338 aa
AA seq
DB search
MGKSEPECVNSSNPAHECNDYCLNKIAEAKRRLLEEQPDSWKGPPEDRTVHPDCINASNP
YHGCSEYCFKKIADANAAAERGEPEKPAGGSGKSGVAPEQADGDDHSGQQEDAATADDGY
PQMTEKQKKLFELQLKMNEARKANQQAMVAEKKSMEPRGESRGISKEKWLEDRKKKIGKL
LDSNGLDMSKSYMLDTQDMAEAKYKKWEKEPAPHGWDVFNQKTLYDAYKKRTKNIEVDMD
AYNRAKETDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKD
VDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcagagccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgat
tactgcctcaacaagatcgccgaggccaagcgccgcctcctcgaagagcaacccgactcg
tggaagggccccccggaggaccgcaccgtgcaccctgactgcatcaacgcctccaacccc
taccatggctgctctgagtactgctttaagaagattgccgatgccaacgcagcggcggag
cgcggggagccagagaagcctgctggaggttctggcaaatcaggagtcgctccagagcag
gccgatggcgatgatcattctgggcagcaggaggacgccgccaccgcggatgacggttac
ccgcagatgaccgaaaagcagaagaagctgtttgagctgcagcttaagatgaacgaagct
aggaaggcgaatcagcaggcgatggttgcggagaagaagagtatggagcctcgtggcgag
agcagaggcatatctaaggagaagtggttggaagacaggaaaaagaagattggaaagctg
cttgattcaaatggcctggatatgtcgaagtcttacatgctggatacacaggatatggca
gaagcaaaatacaagaagtgggagaaggaacccgcaccgcatggctgggatgttttcaac
cagaaaaccttgtatgatgcatacaagaagaggaccaaaaacatagaagtcgacatggat
gcatacaatagagcgaaagaaaccgatcctgaattctaccgtgaggcttcaagtcttcaa
tatgggaaggtgtctagggtggcggaaccaaacatcgaccgaatggttaatgagctcaag
gagcgggacgagaagcgcaaggcgttcagcaggaggcgcaagttcaacgaagacaaggac
gttgactcgatcaacgaccggaacgagcacttcaacaagaagatcgagagggcctttggc
aaatacacgctcgagatcaagaacaacttggaaagagggacggccttgccagattaa
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