Aegilops tauschii (wheat D): 109779485
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Entry
109779485 CDS
T04345
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109779485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109779485
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109779485
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109779485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Peptidase_M9_N
DUF5646
Motif
Other DBs
NCBI-GeneID:
109779485
NCBI-ProteinID:
XP_020193699
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Position
4:4995350..5003759
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AA seq
884 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPREKAKAETRDWLNSVVSDLENQIDNFEAELEGLSFKKGKQRPPRLVHLEKSITRHKA
HIKKLESILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVEDLYSTLPMEKVEA
LEDMVSLAPSILIKGVAAVSTTAVLSTKSPTATSPTQATVSTISQGTSQDQAEETTTLES
NPESVPQTPPPKGGNLGPSVPVVPTAISTSAAAVSVSADTITSPGPVRPVIPATAPTIFA
PAAAVRNAPESMPAVASTPANLSTAVKDDESMSFPPRRPSPAVTEIGLGRGITRGLTSQA
LAAPVSVGPVPGNGSITAIPPINDLSKRNIMNTDERVNSGGLSQQLVSPLGSKVQPQPVL
KTNDAVSSDSSNTSESAVIGGRVFSPPVVPGAQWRPQAPAGFQNQSETGQFRGRPEVTDQ
REKYLQRLQQVQQQQGNLLNASHITGINQKQFSTQQANSLLQQFNSQSSSISSQGGLGLG
VQGPGIPSAFSSQLQPHESQILEQYAGQTKSDEQQQGLADDASVESAATTGPNKHTNEDD
TKAPYSNPPASIAEGTQLSRDSDLSPGQPMQAGMPSSGVGVIGRRSVSDFGAIGDNLSGA
SVVSGHDHLYNLQMLEAAYHRLPQPKDSERAKTYIPRHPSVTPASYPQIQAPIVTNPAFW
ERLGSDTLSTDMLFFAFYYQQNSYQQYLAAKELKKQSWRFHRKYNTWFQRHVEPQVTTDE
YERGSYVYFDFHLADDGNGWCQRIKNDFTFEYNFLEDELSVQPN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagtcggaagctgcagggcgagatcgaccgcgtcctcaagaaggtgcaggag
ggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaaccag
aaggagaagttcgaggcggacctcaagaaggagatcaagaagctgcagcgctaccgcgac
cagatcaagacctggatccagtccagcgagatcaaggacaagaaggttagtgcctcttat
gagcaggctctcatggatgcccgcaagcagattgaacgcgagatggaacggtttaaggtc
tgtgagaaggaaactaaaaccaaggccttctcgaaagaagggttaggtcaacagccgaaa
actgatcctagagagaaggctaaagctgaaacaagagattggcttaacagtgtggttagt
gatttggaaaatcagattgataattttgaagcggagcttgaaggactttcatttaagaaa
ggaaagcaaagacctcctcgattggtacatttagagaaatctattacgcggcataaggct
catataaaaaaattggagtcaattctgagactcttggataatgatgagttgagtcctgag
caagtcaatgatgtgaaagatttcctagaagactatgttgaacgtaatcaggaagatttt
gatgaatttagtgatgttgaggatctctatagcacattgcctatggagaaggttgaagca
ctcgaagacatggtttcacttgctccttccattcttatcaagggtgttgctgctgtttcc
actactgcagttttgagtacaaagagtccgacagcaacttcacctactcaggctactgta
tcaacaatctcacaagggacatcacaagatcaagcagaggaaacaactacgctagaaagc
aatcctgaatcggtgccacaaacaccacctccgaagggtggaaatctgggaccatcagtg
ccagttgtgcccactgccattagtactagtgctgcagctgtttccgtttcggcagatact
attacttccccaggcccagtacgaccagttattcctgccacagcacccacaatatttgct
cctgctgctgctgttcgaaatgctccagagagcatgcctgctgttgcttcaactcctgca
aacttatctactgccgtgaaggatgatgaaagcatgagctttcctcctcgtagaccgtct
cccgcagttactgaaattggtcttggcaggggtattacccgtggcttaactagtcaggca
ttagctgctcccgtaagtgtaggtccagttccaggaaatgggtccattactgcaattcct
ccaataaatgacctgtccaaacgaaacataatgaataccgatgagagggttaacagtggt
ggtctttctcagcagttggtttcacctcttggtagtaaagttcaaccacagccggttctg
aagactaacgatgcagttagctctgattccagtaacaccagtgaaagtgcggttattgga
ggaagggtattttctcctccggttgttcctggggctcaatggaggcctcaagctcctgct
ggtttccaaaatcaaagtgaaactggtcaatttcgtggaagacctgaggtcaccgaccaa
agggagaagtacttgcaaagattgcaacaagtacagcagcagcagggcaaccttcttaac
gcttctcatataacgggcatcaatcagaagcaattttcaacccagcaggccaattccctc
ttgcaacagtttaattctcagagttcttctatctcttctcaagggggccttgggctaggg
gttcagggaccaggtatcccttctgccttctcatctcagctacaacctcatgaatcccaa
attctcgagcaatacgctgggcaaacaaaaagtgacgagcagcaacaaggcttggccgat
gatgctagtgtggagtctgctgcaacaactggaccgaacaagcacactaatgaagatgac
acaaaggctccttattcgaatcctccagcatccatagcagaaggcacccagctatctaga
gactctgatctatcacccgggcagcctatgcaagctggcatgccatcatctggtgttggt
gttattggccggaggagtgtatctgattttggagcaattggagacaatctcagtggagct
tcggtagtttcgggtcacgatcacctttataatttgcaaatgctcgaagctgcataccac
aggcttccccagcccaaggactctgagcgtgcgaaaacttatattccgaggcacccttca
gtgacccctgccagttacccacagattcaggcaccaattgtgacaaatcctgctttctgg
gaaaggctcggtagtgatacattgtctacagatatgttgttctttgcattctactatcag
cagaactcgtaccaacaatatttggccgccaaagaactaaaaaagcagtcatggagattt
cacaggaagtacaatacttggttccaacggcatgtggagccacaggttacgacagatgag
tatgagcggggatcatatgtgtactttgattttcatcttgcagatgatggcaacgggtgg
tgccaaaggatcaagaatgacttcacatttgaatacaacttccttgaggatgaactgtca
gtacagccaaactag
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