Aegilops tauschii (wheat D): 109779727
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Entry
109779727 CDS
T04345
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109779727
Spliceosome [BR:
ats03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109779727
Other components
Complex C specific factors
109779727
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
109779727
NCBI-ProteinID:
XP_040244820
UniProt:
A0A453JPL4
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Position
5:complement(59871350..59879931)
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AA seq
822 aa
AA seq
DB search
MEEDAEGMDRFYYEGPRERTLQTRDDAVYGVFAEGDSDSDYDSEDDEGSRRRKRRRDESE
SDFTRPVQFVSKGMPEGVEQEEQRLGLGQAASSLRTATAGEDTEEIIDLPTGFGQRIAEG
ARARREEKERQYEAVKRGRQASSAEVDDGKPAPAPGSVESNTKVAKMMGMMGYKRGMGLG
KNAQGITAPVGTILRPKNAGLGSIEEFKEAKPFTAKENLPPPPPPPSAKKEKQRWSKKAN
LKRDQVLTKNELLAMRAEQEQDEQPTVVQKVIDMRGPQVRVLTDLKGLSDEQEMGANDVP
MPELQYNVRVLVDETKVDIIRLDGQLRQEQEGVASLVREKEKVAKQEALQKHQLQVMETI
AGVLEQVWLDDTAGLLMLRGLLKTFQELKLRHEEEFKMCSVAWIACQFAHPLLIRVFQGW
QPLQNPLFGLEVMSSWKDLLQCDQPYDFSDATESMAPYEQLVSEVILPAVMISGTNSWEA
RDPEPMLCFLESWEQLLPPIVLHSILEHVIMPKLTAAVESWDPRREKVPIHVWVHPWLPT
LGRRVETLCDSIRYKLSSVLHVWQAHDASAYALLSPWKGVFDPASWEDLIVRYIIPKLKM
ALQEFQINPANQKFDQFNSVMIWASAVPVHHMVHMLEVDFFSKWQQVLYHWLCSPSPDFN
EITNWYKGWRGLFPPELLANERIRMLLTAGLEMMNQAAEGVELVQPVARENLGYLRATEK
RQFDAAQQASQYPAYRSVPGAAMGDMSFKESIQAYAADQGLLFMPRVNKSYNGKPVYEFG
SVSIFIDSVKRLLYAQLQEGTNRWSSVSLTQLLEMNRMARSH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggagggcatggaccgcttctactacgagggcccccgcgagcgcacg
ctccagacccgcgatgacgccgtctacggcgtcttcgccgagggggactccgactccgac
tacgactccgaggacgacgaggggtcgcgacgccgcaagcgcagaagggacgagtccgag
tctgacttcaccaggcccgtgcagttcgtctccaagggaatgcccgagggggtggagcag
gaagagcagaggcttgggcttggccaggccgcgtcctccttgcgcaccgcaaccgcgggg
gaggacacggaggagatcatcgacctgcccacggggttcgggcagcggatcgcggagggt
gcgcgtgccaggcgggaggagaaggagcggcagtatgaggcggtcaagcgcggacgccaa
gcgtcatcggccgaggtggatgatggaaaaccagcgccggcccctggcagcgtggagtcc
aacacgaaggtggctaagatgatgggtatgatggggtacaagagaggaatgggtctcggc
aagaatgctcagggaatcaccgcaccggtggggaccatcctgcgccccaaaaatgccgga
cttggcagtatcgaggagtttaaggaggccaagcccttcactgccaaggagaacctgcca
cccccacctcctccgccgtctgccaagaaggaaaagcaacggtggtccaagaaggccaac
ttgaagagagatcaggtcctgacaaagaatgagttgctggctatgcgcgccgagcaggaa
caggatgagcagcccacggttgtccagaaggtgattgacatgcgagggcctcaggttcgt
gtgctgacagacttgaaggggctcagtgatgaacaggagatgggggcgaatgatgtgcca
atgccagagttgcagtacaatgtgcgggtgcttgttgacgagactaaggttgatatcatc
aggttggatgggcagctgcgacaggagcaggagggggtggctagtttggtgcgggagaag
gagaaagtagcaaagcaggaggcattgcagaaacaccagctgcaggttatggagacgatt
gcaggtgtgctggagcaagtctggttggacgatacagctggtttgctcatgctgcgaggg
ttgcttaagaccttccaggaattgaagctgcgccatgaggaggagttcaaaatgtgcagt
gttgcatggattgcttgccaatttgctcatccattactgatccgggtcttccaggggtgg
caacctctgcagaatccgctgtttggcttggaagtcatgtcgtcatggaaggatctgctg
cagtgtgaccagccatatgatttctcagatgctactgaatcaatggctccatatgaacag
ctggttagcgaggtgatcctgccagctgtgatgatatcaggaactaattcatgggaggct
agggatccagaaccaatgctctgctttctcgagtcatgggagcagttgctgccccctatt
gtactccattcaatattagagcatgtaatcatgccaaagctcacagctgctgtcgaatcc
tgggatccacgtagggagaaggtaccgattcatgtatgggtacacccatggttgccgact
ctaggacgaagggtagagaccttgtgtgactctattcgttacaagctgagtagtgtcctc
catgtttggcaagctcacgatgcatcagcttacgctttgctatctccatggaagggtgta
tttgacccagcaagttgggaagacttgatagtgcgttatatcattcctaaacttaaaatg
gcactccaggagtttcagatcaacccagcaaaccagaagttcgaccagtttaactcggtt
atgatttgggcttctgctgtaccggtacaccatatggtccatatgttggaagttgatttc
tttagcaagtggcagcaggttctctaccattggttgtgttcaccgagtcctgatttcaat
gagatcacaaactggtacaagggctggaggggtcttttcccaccagagttactcgccaat
gaacgcatacgaatgcttctaacggctggtcttgagatgatgaaccaagctgctgaaggg
gttgagttggtgcagccagtggcaagggagaatttgggctacttgagagcaacagagaag
cggcaatttgatgcagcacagcaagcatcacaatacccagcttatcgttcagtgccagga
gcagccatgggagatatgagcttcaaggagtctattcaggcatatgcggctgaccaaggt
ttgctgtttatgcctagagttaataaatcctataatggcaagccagtgtatgaatttggc
tccgtgagtatcttcatagattctgtcaagcgactactctatgcgcaacttcaagaggga
accaatagatggagttctgtgtctcttacacaactgctggaaatgaaccggatggcaaga
tcacactag
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