Aegilops tauschii (wheat D): 109781634
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Entry
109781634 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109781634
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109781634
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109781634
NCBI-ProteinID:
XP_020195808
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Position
6:35124351..35128614
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AA seq
713 aa
AA seq
DB search
MSTWAVMAFLLSVIAAASQLQPVARAAAPGTLGAGVTLQEDQHQVVVDNGIVQVAVSKPQ
GQIIGVRYVDDTNLLYFNNNEISGGYWDVVWNFPGSGYPTATGMNDMLDGTEFRVVSASE
EQVELSFMSTYDPSRLNSVPLNVDKRLVMLRGGSGFYCYAIFEHAGGWPAIDVSEARLVF
KLDPATFNYMAVSDGIQRYMPGAADRDAPRAVPLAYKEAVLLVHPSEPQFAGEVDDKYQY
SMDNKDNRVHGWIAGAGGGDGDRVPVGFWVVTPSNEFKSGGPLKRELTSHIGPTSLTMFM
GTHYIGSDMVARIEAGEHWKKVMGPVFIYLNSNPERGGFQPLWEDAKAQAEVEASRWPYS
FPLSPDFHRAGERGSVTGRLLVRDRYTSGGEDVPARLAYVGLAAPGQPGSWATESKGYQF
WTRSSATGNTFTIDNVRAGEYNLYAWVPGVLGDYVRTAPVTVVPGGAVALGDLVFEPPRS
GPTLWEIGVPDRSATEFFVPDPNHRYLSKLFVARDKYRQYGLWERYAELYPAGDPVFTVG
VSNHSKDWFFAHVTRKSGNGENVPTTRRIRFDMPRVAAGGTYTLRIALAAAHMSKLKVQV
NGATGKGSAGGVFVTPEFGDDNAIARHGEHGRWWSFEFPVDGRLLVQGDNTISVTQARAF
SVFMGVMYDYVRLEGPSGWDSGVTSSVGLGKILPLGLLYGLVVLPTLIFLLSK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtgggcggtcatggcgttcctgctctctgtcattgcggcggcgtcgcagctg
cagcccgtggcgcgcgcggcggctccagggaccctaggcgccggcgttacgctgcaggaa
gatcagcaccaggtggtggtggacaacggcattgtgcaggtggcagtgtccaagccgcag
ggccagatcatcggcgtccgttatgtcgacgacactaacctcctctatttcaacaacaat
gagatatcaggcgggtactgggatgtagtttggaactttccaggatcgggatatcccacg
gccacgggcatgaacgacatgttggatggtaccgagttcagggtggtgtctgccagcgag
gagcaagtggagctctccttcatgagcacctacgacccatcacgcctcaacagcgtcccg
ctcaacgtcgacaagaggctggtgatgctgagaggcggctccgggttctactgctacgcc
atcttcgagcacgccggcggctggccggccatcgacgtctcagaggcccggctcgtcttc
aagctcgaccccgcgacgttcaactacatggccgtctcggacgggatccagaggtacatg
ccaggggcggcggaccgggacgcgccccgggccgtgccgctggcgtacaaggaggccgtg
ctgctcgtgcacccgtcggagccgcagttcgcgggggaggtggacgacaagtaccagtac
tccatggacaacaaggacaaccgcgtccacggctggatcgccggcgccggtggtggcgac
ggcgaccgggtgccggtggggttctgggtggtcacccccagcaacgagttcaagagcggc
ggccccctcaagcgcgagctcacctcccacatcggccccacctcgttgactatgttcatg
gggactcattacatcgggagcgacatggtggcgaggatcgaggccggcgagcactggaag
aaggtcatggggccggtgttcatctacctcaactccaacccagagcggggaggcttccag
ccgctgtgggaggacgccaaggcgcaggcggaggtcgaggcgagccgatggccgtacagc
ttcccgttgtcgccggacttccacagggcaggcgagaggggctccgtcaccggtcggttg
ctggtcagagacaggtacacgagcggcggcgaggacgtgcccgcccggctggcctacgtc
ggcctcgccgctccgggacagcccggctcctgggcgacggagagcaagggctaccagttc
tggacgaggtcgtcggcgaccggcaacacgttcaccattgacaacgtacgggcaggggag
tacaacctctacgcctgggtccccggggtcctcggcgactacgtgcgcacggctccggta
acggtggtgcccggcggcgcggttgccctcggcgacctcgtgtttgagccgccccgatcg
gggccgacgctgtgggagatcggcgtgccagaccggagcgccaccgagttcttcgtccct
gatcccaaccacaggtacctcagcaagctcttcgtcgccagggacaagtacaggcagtac
gggctgtgggagcggtacgccgagctgtaccccgccggcgaccccgtcttcaccgtcggc
gtgagcaaccactccaaggactggttcttcgcgcatgtcacaaggaagagtggcaacggc
gagaacgtgccgacgacgcggcggatccggttcgacatgccccgcgtcgccgccggcggc
acctacacgctgcgcatcgcgctcgcggcggcgcacatgtccaagctgaaggtgcaggtg
aacggggcgacggggaaggggtcggccgggggagtgttcgtgacgcccgagttcggggac
gacaacgcgatcgcgcggcacggcgagcacggcaggtggtggagcttcgagttcccggtc
gacgggcggctgctcgtgcaaggggataacaccatcagcgtcacgcaggcgagggcgttc
agcgtgttcatgggggtcatgtacgattacgtccggctggaagggccctccggttgggat
tctggcgtcacaagtagtgttggtctaggcaaaatcttgcctctcggtttgctatatggg
cttgtcgtgctaccaacattgatatttctactaagcaagtga
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