Aegilops tauschii (wheat D): 109781846
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Entry
109781846 CDS
T04345
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109781846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109781846
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109781846
Spliceosome [BR:
ats03041
]
Complex C
Other components
Step II factors
109781846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
nSTAND3
NB-ARC
FtsK_SpoIIIE
ATPase
SLFN-g3_helicase
AAA_30
T2SSE
Motif
Other DBs
NCBI-GeneID:
109781846
NCBI-ProteinID:
XP_020196030
UniProt:
A0A453QZW3
LinkDB
All DBs
Position
7:112462610..112471092
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AA seq
713 aa
AA seq
DB search
MPAVASFRARASAPAPEMPSFSSGASPQKQQHNARRKQLIRQQRKSLPIASVEKRLVDEV
RKNDTLIVVGETGSGKTTQLPQFLYDGGFCQDGKVIGITQPRRVAAVTVAKRVAEECNDQ
LGRKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVIVVDEAHERTVHTDVL
LGLLKKVQHSRCLHANKNGKISDRPDHSQSSTLKACQGIKIAPLKLIIMSASLDAKCFSD
YFGGAKAVHIQGRQYPVDTLYTYQPESDYLDATLVTIFQIHLEEGPGDILAFLTGQEEIE
SLERLIQERARQLPADSSKIWITPIYSSLPSEQQMNAFKPAPSGARKVVLATNIAETSVT
IPGIKYVIDPGMVKARAYNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCFRLFQECE
FDKLAESTIPEIKRCNLANVVLQLKALGIDDIIGFDFMEKPSRTSILKSLEQLILLGALT
DDYKLSDPVGKQMARLPLDPMYSKALIVSNEFKCLEEMLIVVSMLSVESIFFTPREKLEE
ARAARKSFESSEGDHITLVNVYRAAAECLEKSKNANAKEKTMEKALNRWCFENFINYRSL
RHARDVHSQIQGHVQQMGLNLSSCGDDMVQFRRCLTAAFFLNAAMRQPDGSFRALATGQS
VQMHPSSVLFRTKPDCVIFNELVRTTQNYVKNLTRIDPLWLAELAPQYYATED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtggcgagcttcagggcccgggcgtctgcgccagcaccagagatgccgtcc
ttctcttctggcgcttctccgcagaagcagcagcataacgcgcggaggaagcagctgatt
cgtcagcagaggaagtcgcttcccatcgcgtcagtggagaaaagacttgtggatgaggtg
aggaagaatgacacgctgattgttgtcggcgagaccggtagtggcaaaacgactcaattg
ccacagtttttgtatgatggtgggttttgtcaggatggaaaagtcattggcatcactcag
cctcgaagagttgcagctgtgacagtagcaaagcgtgtcgccgaggaatgcaatgatcag
ttgggcagaaaggttggatactctataagatttgatgattccacatctaatgcaacaagg
attaagtacatgaccgatggtttgcttctaagggaagcccttttggatccactcttgtct
aagtatagtgttatagttgttgacgaggcccacgaaagaaccgtccatacagatgtattg
ctgggtttgttgaaaaaagtgcagcattcccgatgtcttcatgcgaataaaaatggaaag
atttctgacagaccagatcactctcaatcttctaccctgaaggcatgccagggaataaag
attgcacctctaaaactgattattatgtctgctagtctggatgccaagtgtttttctgat
tattttggtggcgctaaagctgtacatattcaaggacggcaataccccgtggacacactg
tatacttatcagcctgagtcggattatctagatgctacactagttacgatctttcagatc
catttggaggaaggacctggagacattcttgcatttttaactggtcaagaggagattgaa
tcactagagaggcttattcaagagcgtgctcgtcaacttccagcagatagtagcaagata
tggattacacctatctactcatctcttccatcagaacagcaaatgaatgcatttaagcca
gcaccatctggagcccggaaggtagttctagcaacgaatattgcagagacttctgtaacg
atacctggtattaaatatgttattgatcctggtatggtcaaagcacgcgcctacaatcct
gtaactggaatggagtccctaatcatcatccctgtctctaaagcacaggctcttcaaagg
agtggccgtgctggacgtgaggggccagggaagtgctttcggttgttccaagaatgcgag
tttgataaactggcggaatcgactattcctgagattaaacgatgtaacctcgcaaatgtt
gtactacagctcaaagctcttgggattgatgacatcataggtttcgattttatggagaaa
ccatcaaggacgtccattttgaaatcattggagcaattgattttactaggagctttgact
gatgattataagctgtcagatccagtgggtaaacagatggctaggctgcctttagatccc
atgtactccaaggcattgatagtgtcgaacgaattcaagtgcttggaagaaatgttgatt
gttgtttctatgctttcagtggagtcaattttcttcacccctcgtgagaagttggaagag
gcaagagctgctaggaagagttttgaaagctctgaaggagaccatataactttggtgaat
gtatatcgagctgccgcagaatgcttggaaaagagcaaaaatgcaaatgccaaagaaaag
acaatggaaaaggctttgaacagatggtgcttcgaaaacttcatcaattatcggtcttta
agacatgctcgtgatgttcacagccaaattcagggccatgtccaacaaatggggcttaac
ctgtcatcgtgcggcgacgacatggttcagttcaggaggtgcctcaccgccgccttcttc
ctgaacgcggcgatgcggcagccagatgggtcattcagggcgctggcgacggggcagagc
gtgcagatgcacccttcgtcggtgctgttccggaccaagccggactgcgtcatcttcaac
gagctggtccggacgacgcagaactatgtcaagaacctcacccgcatcgacccgctgtgg
ctggccgagctcgccccgcagtactacgccacagaagactag
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