Aegilops tauschii (wheat D): 109782438
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Entry
109782438 CDS
T04345
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109782438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ats04131
]
109782438
Membrane trafficking [BR:
ats04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109782438
Hops complex
109782438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109782438
NCBI-ProteinID:
XP_020196649
LinkDB
All DBs
Position
2:357089649..357095253
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AA seq
957 aa
AA seq
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MYQWRKFEFFEEKGAGRGGGGGAPAVPAEIAGRVTCSSGGRGRVAIGCDDGTVGLLDRGF
RLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQASSQSSAVCLKVFDLDKVQEEGSSTTT
PFCVQILRVFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFTL
QVEPVSDGTSSPITGLGFRVEGQAHQLFAITPSSITLFSLHHQPPRRQTLDQIGCETNAV
AMSDRMDLIVGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRSRKNTLNV
YDLKNRLIAHSMPVGDVSHLVTEWGYIILIMSDKRILCIGEKDMESKLDMLFKKNLYTVA
INLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDAKRI
HNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAIRV
CRAAGYHEHAMFVAKKAGRHELYLKILLEDLARYDEALQYISGLEANQAGLTVKEYGKIL
VDHRPAETVKILLRLCTDGGDPTTRRGSNSMRLLMIPSPMDFVNIFVHSPQYLMEFLENY
IKAVKDSPAQTEIHNTLLELYISKDLSFPSMSQENDFDDHNSKERKGKEITNGYKSGTRE
KAKLGKEENKTAKDIVDRQRKGLALLKSAWTPEMEEPLYSVDLALIICNANAFKDGLLFL
YEKLKLYKEVISCYKQAHDHEGLIACCKKLGDSTQGGDPSLWGDLLNYFGELGEDCSKEV
KEVLTYVEKADVLPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSVDKYQE
ETELMKREIEDLKTNAKVFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECA
PEYRSVMEAKQKLELNARDHDLFFRQLRGSKDGFSVVADYFSKGVVSKTTIPPENAP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcgcaagttcgagttcttcgaggagaagggggcagggcgcggcggggga
ggcggcgccccggccgtgccagccgagatcgcgggccgagtgacctgctcctcgggcggc
cgcggccgcgtcgcgatcggctgcgacgacggcaccgtggggctcctcgaccgcggcttc
cgcctctcctacgggttccaggcctacgcctcatccgtccttttcctccagcagctcaag
caaagaaatgttcttgtcacggttggagatgatgatcaagcgtcttcacagtcatcggca
gtctgtctaaaagtttttgaccttgataaagtacaagaagagggttcaagtacgacaacc
cctttctgtgttcaaattttgcgggtcttcacgaatcaatttcctgaggccaagattaca
tcatttttggttttagaagaagctcctcccatcctgttgattgctatcggattggacaat
ggttgcatttattgcatcaaaggtgatattgcacgtgagcgtatcacacgcttcacattg
caagttgaacctgtttcagacggcacaagttcacctattactggtcttgggttccgagtt
gaagggcaggcacatcagctctttgccattactcctagttccataaccttgttcagcttg
catcatcaaccaccaaggaggcaaacacttgaccaaattggttgtgagaccaatgccgta
gcaatgagtgaccgcatggatctgattgttggtagaccagaagctgtgtatttctacgaa
gttgatggtagaggcccttgttgggctttcgatggtgagaagaagtttgtcggttggttt
cggggttatttactttgcataattgaagatcagagaagccgaaagaatactcttaatgtt
tacgatcttaagaatcggttaattgcgcatagcatgcctgtgggggatgtttcacatttg
gtcactgagtggggctatattattctcataatgagtgataaaaggatactctgcattggg
gagaaagacatggaaagtaagctcgacatgttatttaagaaaaatctttatacagtcgca
atcaatcttgtacaaagtcagcaggctgatcctgcttcaactgccgaggttctacgtaag
tatggtgaccatctgtatggaaaacaagaatatgatgaggccatgtctcaatatatccac
accattggtcatcttgaaccgtcatatgttatacagaagtttctcgatgcaaagcgcatc
cacaacctgacaaattatctagaaaagttacatgatagaggattagcatccaaagaccac
acaacccttctgttgaactgctataccaaattgaaagatgttgagaagctgaaccatttc
atcaaagatgaagatggggtaggtgaaattaagtttgatgtggaaactgccataagagta
tgtcgtgcagctggatatcatgaacatgctatgtttgtggccaaaaaggctgggagacat
gagctgtatttgaagattttacttgaggatcttgctagatatgatgaggcgctgcagtat
atatctggccttgaggcaaatcaagctggtcttactgtaaaagaatatggaaaaattctt
gtggaccatagacctgctgaaactgttaaaatactgttgaggctttgtactgacggggga
gatcctacgacaaggagaggttcaaatagcatgcgtttgcttatgataccttcaccaatg
gactttgtaaatatatttgtgcacagcccacaatatctcatggaatttctagaaaactat
atcaaagcagtcaaggactcacctgctcagacagaaatccataacacacttctagagctg
tatatatcaaaagatttaagcttcccatctatgtcacaagaaaatgactttgatgatcac
aatagtaaagaaagaaaagggaaggaaattacaaacggctataaatcaggcacaagggag
aaagcgaaacttggaaaagaagaaaataaaacagcaaaggatattgttgacagacaaagg
aaaggacttgctttgctgaagtctgcctggacacctgagatggaagaacctttgtattct
gttgatcttgctcttatcatttgtaatgcaaatgcatttaaagatggcttgttatttctg
tatgagaaattaaaactctacaaagaggttatcagttgctacaagcaagctcatgaccat
gaaggtttaattgcatgctgtaagaagctaggggactcaactcaaggaggggatccatct
ctctggggtgacctgttgaattattttggtgagcttggggaagattgctctaaggaagtt
aaagaggtcttgacctacgttgagaaggcggatgttttgcctccaattgttgtcctacag
acactatcaaaaaacccatgcttgactctctcagttgtcaaggattacattgctcgcaaa
cttgagcaagaatcaaagctaatcgaagatgacagaaaatctgttgacaagtaccaggaa
gagacagaattgatgaaaagggagatagaagacctcaagacaaacgcaaaggtttttcaa
ctaagcaagtgcacagcatgcaccttcacccttgatcttcctgctgtccatttcatgtgc
atgcactcgttccatcttcgctgccttggggacaatgagaaggagtgcccggaatgtgca
cctgaatacagatctgttatggaggcaaagcagaagctagaactaaatgccagggatcat
gatctcttcttcaggcagttaaggggttcgaaggatggcttttctgtggtagcagactac
ttcagcaagggcgtagtgagcaaaacgacgattccacctgaaaatgccccatag
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