KEGG   Aegilops tauschii (wheat D): 109782663
Entry
109782663         CDS       T04345                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03020  RNA polymerase
ats03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109782663
  09124 Replication and repair
   03420 Nucleotide excision repair
    109782663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ats03021]
    109782663
   03400 DNA repair and recombination proteins [BR:ats03400]
    109782663
Transcription machinery [BR:ats03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109782663
  RNA polymerase III system
   RNA polymerase III
     109782663
  RNA polymerase I system
   RNA polymerase I
     109782663
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109782663
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 109782663
NCBI-ProteinID: XP_020196874
LinkDB
Position
2:complement(444219394..444222066)
AA seq 209 aa
MAAAEGEASRLFRVRRTVMQMLRDRGYLVVDADVDMTMGEFVGRYGDPVRRDDLVINRAK
KDKPDEQIYVFFPNEPKPGMKTVKSYAEKMKQENVNNGILVVQQALTAFARNAVLGLSQE
KEKLMLEVFQEGELLINIKNHDLVPEHVLLTKEQKKTLLEKYTVKETQLPRIQITDPIAR
YYGMRRGQVVKITRPSETAGKYVTYRYVV
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcggcggcagagggggaggcgagccggctgttccgcgtccggcgcacggtgatgcag
atgctgcgggaccgcgggtacctggtagtggacgccgacgtcgacatgaccatgggcgag
ttcgtcgggcgctacggcgaccccgtgcgccgcgatgacctcgtcatcaaccgcgccaag
aaggacaagcccgacgaacagatctacgtcttcttcccgaacgagcccaagcccggcatg
aagacggtcaagagctacgccgagaagatgaagcaggagaacgtcaacaatggcatactc
gtggtgcagcaggcgctgaccgcctttgcccgcaacgcggtgctcgggttatcgcaggag
aaggagaaattgatgctcgaggtcttccaggaaggggagcttcttataaacattaagaat
cacgatctagttcccgagcacgtgctcctcacaaaggagcagaagaagacgctgttggag
aaatacactgtgaaagaaactcagctccctcggattcaaatcacggatccaatagcaagg
tactatggcatgaggcgtggacaggtcgtgaaaatcaccaggcccagcgagactgctgga
aaatatgtgacgtatcgctatgttgtctga

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