KEGG   Aegilops tauschii (wheat D): 109783018
Entry
109783018         CDS       T04345                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03030  DNA replication
ats03410  Base excision repair
ats03420  Nucleotide excision repair
ats03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109783018
   03410 Base excision repair
    109783018
   03420 Nucleotide excision repair
    109783018
   03430 Mismatch repair
    109783018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ats03032]
    109783018
   03036 Chromosome and associated proteins [BR:ats03036]
    109783018
   03400 DNA repair and recombination proteins [BR:ats03400]
    109783018
DNA replication proteins [BR:ats03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109783018
  DNA Replication Termination Factors
   ELG1-RFC complex
    109783018
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109783018
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109783018
  Check point factors
   HRAD17(Rad24)-RFC complex
    109783018
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA RuvB_N Rad17 DUF815 Sigma54_activ_2 AAA_22 Mg_chelatase AAA_5 AAA_16 AAA_11 nSTAND3 AAA_2 NPHP3_N ABC_tran AAA_24 AAA_29 DUF5906 FtsK_SpoIIIE ATPase_2 RNA_helicase TsaE
Other DBs
NCBI-GeneID: 109783018
NCBI-ProteinID: XP_020197234
UniProt: A0A453M142
LinkDB
Position
5D:complement(500367889..500372294)
AA seq 354 aa
MLWVDKHRPKTLDKVIVHEQVAQNLKKFVAEQDCPHLLFYGPPGSGKKTLIMALIKQMFG
AGVEKVKMENKTWKIDTGTRTFDLELAMLSSSHHVEMNPSDAGFQDRYVVQEVIKEMAKS
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNVRVNAPTEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQY
PFSANQVAPPLDWEQYVSEIATEILSEQSPKRLYSVRQKFYELLVNCIPPESILKKLLTE
LMKKLDSDLKHEVCHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLCAAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgtgggtggacaagcaccggccgaaaaccctagacaaggtcatcgtccatgagcag
gtcgcgcagaacctcaagaaattcgtggcggagcaggactgcccgcacctgctcttctat
ggcccaccggggtccggcaagaaaaccctaatcatggcgctcatcaagcagatgttcggc
gccggtgtggagaaggtgaagatggagaataagacgtggaagatcgatactgggacgagg
acatttgatcttgagctggcgatgttgtcaagttcccaccatgtggagatgaaccccagc
gatgctggctttcaggacaggtatgttgttcaggaggtcatcaaagagatggccaagagt
aggcccattgatgccaagggcaagagagcatttaaagtgcttgtcctaaatgaagttgac
aagctgtcacgagaagcacaacattccctccgtaggacaatggagaaatacagtgcatcg
tgtagactcatattatgctgtaatagctcctcaaaggtgacagaagctgtaaggtcccgt
tgcttgaatgtgcgagtgaatgcacctaccgaagatcagattgtacaagtactggaattc
attgggaagaaagagaatctgcaacttccatttggatttgctgctcggatagcagctcaa
tcaaaccgcaacttgaggcgagcaatattattttttgagacatgcaaagtccagcaatat
ccattttcagcaaatcaagtggcacctcctcttgactgggagcagtatgtgtctgaaata
gcaactgaaatcttgagtgaacaaagccctaaaaggctatattctgtacgccagaaattc
tatgagttacttgtgaattgtatcccacctgaaagcatcttgaagaagttgttaaccgag
ttaatgaagaagttagactctgatttgaagcatgaagtttgtcactgggctgcacactat
gaacacaagatgcgacttgggtccaaggccatttttcatctggaagctttcgtggccaag
ttcatgagcatttacaaggagttcctttgcgccgcatttggttga

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