Aegilops tauschii (wheat D): 109784032
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Entry
109784032 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ats03009
]
109784032
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109784032
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
Pre-60S particles
Helicases
109784032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109784032
NCBI-ProteinID:
XP_020198224
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All DBs
Position
4D:37034660..37044724
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AA seq
658 aa
AA seq
DB search
MAKKQKQRGSLRGEEHVEAAAAAAHEDAPAANAEGEAAAQEAGGSGSEVAEGRSADAASG
GVEEGKEEEAAAAEEEEREVTFDELGLDEQLKRALRKKGLTKTTPIQREAIPLILEGKDV
VAKAKTGSGKTFAYLLPLLQELLKLCKEGRIRKSAPNALILVPTRELCQQVYNEASSLLE
LCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMI
LDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVG
HAKDDVVPRNVQQFWISCSAKDKMLYILSLLKLELIQKKVLIFVNSIDNAFRLRLFLEKF
AIRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDNKTKEAKQTNKESKKDSKGSRKHL
QQTLDAEFGVVRGIDFKNVFTVVNFDMPPNPAGYIHRIGRTGRANKTGASISLVSPEEDN
VFEEIEHMLQDVEKKDTNCILPFPLLTKNAVESLRYRAQDVARSVTSRDIQEARRQDVKN
EILNSEKLKAHFEENPTDLDLLKHDKLLTNKSIPAHLRDVPEYLIDPTTKEASNAVKLSR
AAMGLDNPRRKKRMGFRSGSGKSSDPLRTFSAEGKSRKRRGKEREGDDRRKRRKKAEI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagcagaagcagcgcggctcgctccggggggaggagcatgtagaggcggcg
gcggcggcggcgcacgaggacgcaccggccgcaaacgcggagggggaggcggctgcgcag
gaagcagggggctctggaagcgaggtggcggaggggcggagcgcggacgctgcgagtggc
ggcgtggaggaggggaaggaggaggaggcggcggcggcagaggaggaggagagggaggtg
acgtttgatgagctggggctggacgagcagctcaagagggccctgaggaagaagggcttg
accaagaccaccccgatccagcgagaggccatcccgctcatcctggaagggaaggatgtg
gtcgcgaaggccaagactggttctggaaagacctttgcctaccttctcccgctgctgcaa
gagctgttgaagttgtgcaaagaagggcgtattcggaaatccgcaccaaatgccttaatc
ctggtgccaactcgcgagttatgccagcaggtttataatgaggcatcatctctccttgag
ctgtgtacatccaagttgaagattgttcaagtgaccgcgagcatgtcagataaggatatt
aaacttgcattgtctgggccccctaatattcttgtgacaaccccagcttgtgttgcagca
tgcatatcaaagggcattgtccagggatcatctattaaagagtcactttcaatgatgatt
cttgatgaggctgaccttcttctatcctatcgctgcgaagatgacttgaaggcacttgtc
ccacatatcccaagaagttgccaatccatcctcatgtctgcaacttcaagccctgatatt
gacaaactaacaaagctacttctgcacaacccttttgttttaactcttaccgaggttggt
catgcaaaggatgacgtggtccctagaaatgtgcaacaattttggatttcatgcagtgct
aaggataagatgctttatatcctttcccttctgaagttagagcttattcaaaagaaagtt
ctaatatttgtgaactcaattgacaatgcattcagattaagattgttcctggaaaagttt
gcgataagatctgcagtgttgaatgctgagttgccacaaaattctcgcctacatattatt
gaggctttcaatgctaggctattcgattacctgatagcaacagatgacaataaaacaaag
gaggcgaagcaaaccaataaggaaagcaaaaaagattcaaaggggtcacgcaaacatttg
caacaaactttagatgctgaattcggagtcgtcagaggaattgacttcaaaaacgttttc
acagtagttaattttgacatgcctccgaatcccgctgggtatattcacagaataggacga
acagggagggcaaataaaaccggtgcatctatatcacttgtttcaccagaggaggataat
gttttcgaagagattgaacacatgttgcaagatgttgaaaaaaaggataccaactgcatt
ttacctttcccgttactcacaaaaaatgctgtcgagtccctacgatatagggctcaggat
gttgctaggagtgtgacaagccgtgatatacaggaagcgcgtcgtcaagacgtaaagaat
gaaatcctcaattctgagaagttgaaagctcattttgaagagaatccaacagacctcgat
ttgctcaaacatgataagttgcttaccaacaaatcaattcctgctcacctgcgtgatgtc
cccgaatacctaattgaccccacaacgaaagaagccagcaatgcagtcaaactttcgagg
gctgctatgggtcttgataatccccgaaggaagaaaagaatgggattcaggagtgggtca
ggcaaaagtagcgatcccctcagaacgttctctgctgagggcaaatcacgaaaacgaagg
ggaaaggaaagagaaggagacgatagaagaaagaggaggaagaaggcagaaatctaa
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