Aegilops tauschii (wheat D): 109784689
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Entry
109784689 CDS
T04345
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109784689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109784689
Spliceosome [BR:
ats03041
]
Complex A
U1 snRNP components
U1 related factors
109784689
Complex B
109784689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
109784689
NCBI-ProteinID:
XP_040247601
UniProt:
A0A453MTC4
LinkDB
All DBs
Position
6:complement(13799932..13816029)
Genome browser
AA seq
986 aa
AA seq
DB search
MASNMQTPGPPQPPRPPMMGSTAPQNMGQPMPMQWPPGPPQQPPQFMQPAPQQYRPIGQA
MPGVNMGMPGQMQHFQQPGPHMPHSGHVPPASQAVPMPYQAARPMSSAPMQPQQQAVFPG
GLMPTMGAPMPPPSYTYQPTSVPPGSQPWGTAPGQGAPLVSPMVQPGHQSLSASVPPVSS
TEPSSADWQEHSSGDGKKYYYNKRTKQSSWEKPAELMTPLERADASTEWKEFTTAEGRKY
YYNKVTKQSKWSIPDELRIARELAEKTSNQQPAREIESTTVAPVGSTSVSVETSLPATQS
SSLVGTIAPSSHDAIANLPPPGAGPSYNGDISSSSSMQNGGTSAVVAPVTTSTGDPSVAS
DAGTNRSTYGSSSVPSTTDTKVGASAEDLEEAKKTMPTAGKINVTPLEDKTSEEEPVVYA
TKLEAKNAFKSLLESANVQSDWSWDQAMRVIISDKRYGALKTLGERKQAFNEYLNQRKKI
EVEERRVKQRKARDDFFTMLEECKDLTSSLRWSKAITMFGHDERFNAVERPKEREDLFEN
YLVELQKKEKAKAAEEHKRRIAEYREFLESCDFIKANTQWRKVQDRLEDDERYARLEKID
RLDVFQDYIRHLEKEEEEQKRIRKEQLRRQERKNRDEFRKMMEEHVADGTLNAKTYWRDY
CSQIKDSRAYLAVASNLSGSMPKELFDDVMEELDKQYQDDRALIKDEVKSGKIPMLASWT
LEDFQAAVTEDEKYKGVSNINIKLIYEDQIERLKEKDLKEAKKRQRLGDNFLDLLYSIKE
ITAASTWDDSKSLFDDTQEYRDLGGETYAKELFEEYIARLKERLKEKERMREEEKAKKEK
DREEREKKKEKEKEKKEKDRKEKERDREKEREKEKGKDRSRRDEMDIDDDVEIHASKDKK
REKDKEKKHKRRHHDTTDSERDEKDESRKSRRHSSDRKKSRKHTHASDSDSENRHRRHKK
DRDSSRKNGGHEELEDGELGEDGEIH
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatatgcagacacctggtccgcctcagcccccccggcctcctatgatgggt
tctaccgcaccacaaaatatgggacaaccaatgcccatgcagtggccaccaggtccgcca
caacagcctcctcagttcatgcaaccagcgccacaacagtatcggcctattggtcaggcc
atgccaggagttaacatgggcatgccagggcagatgcaacattttcagcaacctgggcca
catatgcctcactctggtcatgttccgcctgcatcgcaagctgttcctatgccgtaccag
gcagctagacctatgtcatcagctcctatgcagccacagcagcaagctgtattccctggt
ggacttatgcccaccatgggcgcccctatgccgcctccttcttatacctatcaaccaaca
tcggttcctcctggatctcaaccctggggcacagccccgggtcagggcgcacctcttgtg
tcgccgatggtgcagcctgggcatcagtctctctcagcttcagtgcccccagtgagctca
actgaacctagctctgcggattggcaagagcacagttcaggggatggaaagaagtactat
tacaataagaggacaaagcaatcaagttgggagaaacctgctgagttgatgacccctttg
gagcgggctgacgcttcaactgaatggaaagagtttactacagcagaagggcggaagtac
tattacaacaaagtgacaaagcaatccaaatggtctattcctgacgagctaaggattgca
cgtgaattagcagaaaagacatcaaatcagcagcctgcccgggagattgaatccactact
gttgcccctgttggatccacttctgtttctgtggagacttccttacctgccacacagtct
tcatctttagtaggaacaattgctccaagctcccatgatgcgatagcaaacttgcctcct
cctggtgctggcccgtcgtacaatggggatatatcttcttctagttccatgcaaaacggt
ggaacaagtgctgtggttgcccctgttacaacgagcactggagatccatcagttgcaagt
gatgcagggacaaacagaagcacttatggaagttcatctgtacctagtactactgacaca
aaagttggagcatctgctgaagatttggaggaggccaaaaagacaatgccaactgcaggg
aagatcaatgttactccgctggaggataaaacaagtgaagaagaacctgttgtttatgct
actaagttggaagcaaagaatgcattcaagtccctgcttgaatcggcaaatgttcagtca
gattggtcatgggatcaggccatgagagttattataagtgacaaaagatatggtgctctg
aaaactcttggagagagaaagcaagctttcaatgagtacttaaaccagcggaaaaagatt
gaagttgaggagaggcgtgtcaagcaaaggaaagcacgtgatgattttttcacaatgctg
gaagaatgtaaggaccttacatcatcactgagatggagcaaagcaattactatgtttggg
catgatgaaaggttcaatgctgttgaacgccccaaggagcgtgaagatttatttgagaac
tatctcgtggagctgcagaagaaggaaaaagcaaaggctgctgaagagcacaaaagacgc
atagcagaatatagagaatttcttgagtcatgtgatttcatcaaggcaaacacccagtgg
cgaaaagttcaagatcggctagaggatgatgaacgctatgcccgacttgagaagattgac
cgcttggatgtttttcaagactatataaggcatcttgaaaaagaagaggaagaacagaag
agaattcggaaggagcaattaaggagacaagaacggaaaaaccgcgatgagtttcggaag
atgatggaagaacatgttgctgatggcacacttaacgcaaaaacttactggcgtgactac
tgttcacagataaaagattcacgtgcttacctggcagttgcttcaaacttgtctggctcg
atgccaaaagaactctttgatgatgtcatggaggagcttgataagcagtatcaagatgac
agggctttaattaaagatgaagtgaaatctggaaagattcctatgttggcctcatggaca
ttagaggacttccaagctgctgttactgaggacgaaaaatataaaggagtgtcgaacata
aatatcaagcttatttatgaggaccaaattgaaaggctcaaggaaaaggatctaaaggag
gccaagaagcgtcagcgactgggtgataattttctggatctactgtattcaatcaaggaa
attactgctgcttcaacatgggatgattctaaatcactatttgatgatacccaggaatac
agggatctgggtggcgagacatatgctaaagagctttttgaagagtatattgcccgcctc
aaagaaaggcttaaagagaaagagcgcatgagggaagaagagaaggcgaagaaagagaaa
gaccgtgaagagagagaaaagaagaaagagaaggagaaggaaaagaaggagaaagatcgc
aaagaaaaagaaagagaccgagagaaggaaagagaaaaggaaaaaggaaaagaccggtca
aggagagatgaaatggatattgatgatgatgtggaaattcatgcctcgaaagataagaaa
cgagagaaggataaagaaaagaagcataaaaggcgccaccatgacaccacagattctgaa
agggatgagaaggatgaatcgaggaaatctcgaaggcatagcagtgatcgcaagaaatct
aggaagcacacccatgcttcagactcagatagtgaaaaccggcatagaagacacaaaaag
gatcgagatagttcccgcaaaaatggtgggcacgaggagcttgaagacggtgaacttgga
gaagatggggagatccattag
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