Aegilops tauschii (wheat D): 109785353
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Entry
109785353 CDS
T04345
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03020
RNA polymerase
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109785353
09124 Replication and repair
03420 Nucleotide excision repair
109785353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109785353
03400 DNA repair and recombination proteins [BR:
ats03400
]
109785353
Enzymes [BR:
ats01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109785353
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109785353
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109785353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109785353
NCBI-ProteinID:
XP_020199539
UniProt:
A0A453LPU4
LinkDB
All DBs
Position
5:468096233..468104452
Genome browser
AA seq
1221 aa
AA seq
DB search
MEDDEYEEGMEMDMGGHQHLQHRGYGAEEEVEGGYAGGGDGEDEEEEARDEEEITQEDAW
AVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHK
ISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHDCEEVTET
AEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMS
TNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPY
IRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIG
KRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAE
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITS
GLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHN
SHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISPAVIPQ
AAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRP
LFIVENQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISMTIRDLET
SRHNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNY
QLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS
IDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRV
SGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVR
MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLI
ECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFL
GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFL
KERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM
AMAIAPRMLTHEVKGARDKHR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgaatacgaggaggggatggagatggatatgggagggcaccagcacctc
cagcaccgggggtacggagctgaggaggaggttgaggggggatacgccggcggcggggac
ggggaggatgaggaggaggaggcgcgggacgaggaggagattacccaggaggacgcctgg
gccgtcatctccgcctacttcgaggagaagggcctcgtgcgccagcagctcgactccttc
gacgagttcatccagaacaccatgcaggagatcgtcgacgagtcggccgacatcgagatc
cgccccgagtcgcagcacaaccccggccgccaggccgagttcgccgagacactccacaag
atcagctttggtcaaatctatctgagcaaaccaatgatgactgaagctgatggagagact
gctaccttgttccccaaatcagcaaggctcaggaatctgacatactcagcaccactttat
gtagatgtatcatacagagttgtaaagaaaggacatgactgtgaagaagttacagaaact
gcggagtatccgaaagtcttcattggaaaggttccaatcatgctgcgttctagttactgc
acactgtttcaacaatctgaaaaggatctcacagaacttggagagtgcccttatgaccaa
ggaggatattttgtaatcaacggtagtgaaaaggttctcattgcccaggagaagatgagc
actaaccatgtctatgtgtttaagaagaggcaaccaaataagtttgcatatgtgggtgaa
gtccgttcaatggcagagaaccagaacagacctgctagtagcatgtttgttcggatgctt
tcccgagcaggcgcgaaagggggttcatctggtcaatatatccgtgctactctgccctac
attcgtgcagatattcccatcatcattgtgtttagagcactaggatttgttgctgacaaa
gatatactggagcacatatgctacgatttctccgatacacaaatgatggaattgctgcgc
ccatctttggaggaagcttttgtcattcaaaatcagcaggttgctctggactacattgga
aagcgtggtgctacagttggtgtaactcgagaaaaaagaataaagtatgcgaaagagata
cttcaaaaggaaatgctgccccatgttggtgtaggcgaattctgtgaaactaaaaaggca
tactactttgggtatattattcaccgcctgttgatgtgtgctcttggtcgaagagctgaa
gatgacagagatcattacggcaacaaaaggctcgaccttgcaggtccattgcttggagga
ctgttcagaatgcttttcaggaaattgacgagggatgtgaggtcatatgttcagaagtgt
gtcgataatgggaaggaagttaatttgcaatttgctattaaagctaaaaccattactagt
ggcttgaagtattcccttgctactggaaactggggacaggctaaccaagctggtacaaga
gccggtgtgtctcaggtgcttaatcgccttacgtatgcttctacattatcacatcttcgg
aggttgaactctcccattgggcgtgaagggaaactggcaaaacctcgccaattgcataat
tctcattggggaatgatgtgccctgctgaaacacctgaaggacaggcttgtggcttggtt
aaaaatcttgccttgatggtttatatcactgttggttctgccgcaaatcctattttggaa
tttttggaagagtggggcacagaaaattttgaggagatatcaccggcagtcattcctcaa
gctgctaaaatatttgtcaatggttgttgggttggaattcataggaatcctgacctattg
gtgaagacccttcgtcgtttaagaagacagattgatgtcaacactgaagttggtgtcgtt
cgtgatattcgtctgaaagaacttcgactctatactgattatgggcgttgcagtcgccca
ctgtttatcgttgaaaaccagaggcttctaattaagaagaaacatatccgagcattgcag
caaagggagactcctgatgaaggttggcatgacttggttgccaaaggatttatagagtac
atagacactgaagaggaagaaactactatgatctctatgactatacgtgaccttgaaact
tcgaggcataatccaggggaggcatattctgagacttatacacactgtgagatccaccct
tcattgatacttggtgtgtgtgcgtcaattattccttttcctgatcacaaccagtcacct
cgtaatacatatcagtctgctatgggaaagcaagccatgggaatctatgttaccaactat
cagttaagaatggacacattggcctacgttctgtactacccacaaaagcctcttgttact
actcgtgctatggaacatttgcacttcaggcagttaccagctggcattaatgcaattgtt
gctattgcatgctactctggatataaccaagaagattcggttattatgaaccaatcttca
atagatcgtgggttcttcagatcactatttttccgctcttacagagatgaggaaaagaag
atgggaactcttgtcaaagaggaatttggtcgaccaaatagggagaacactatgggaatg
cgccatgggtcttacgataaattagatgatgatggccttgcaccaccgggaacaagggtc
tctggggaagatgtcattattgggaagacatctccaattccacaagatgatgctcaaggg
caagctactagatattcaaagcgtgatcatagtacttctctgcgtcacagtgaaagtggg
atggtggatcaggttctgttgacaacgaatgctgatggtttaagatttgtcaaggttaga
atgcgatcagtgcgcataccacaaataggagataagttcagcagtaggcatggtcagaag
ggaactgttggaatgacttacacacaagaggacatgccatggacaatcgaaggcatcaca
ccggatatcattgtgaatccacatgctattccatcccgtatgactattggccagctgatt
gagtgtattatgggtaaagtcgcggctcacatgggaaaggaaggagatgcaactcctttc
actgatgttacggtggataacatcagtaaagcactgcacaagtgtggctatcagatgcgt
ggatttgagaccatgtacaatggtcatactgggagaaaattgactgcaatgattttctta
ggtccaacttactaccagagacttaagcatatggtggatgacaaaattcactctagaggt
cgtggtcctgtccagatactgaccagacagccagcagaggggcgctcacgtgatggtggt
ctccgttttggagaaatggagagggattgcatgattgctcatggagctgcttttttcttg
aaggaaaggttatttgaccagagcgatgcttacagagtgcatgtttgtgagaagtgtgga
ctcattgccattgccaatctcaagaagaattccttcgaatgcagaggctgcaagaacaaa
actgacattgtccaggttcatataccgtacgcatgtaagctcctcttccaggagctcatg
gcgatggcgattgctcccaggatgctcacccatgaggtcaagggtgcgagggataagcat
cgttga
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integrated database retrieval system
