KEGG   Aegilops tauschii (wheat D): 109785724
Entry
109785724         CDS       T04345                                 
Name
(RefSeq) histone deacetylase 3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03082  ATP-dependent chromatin remodeling
ats03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109785724
   03083 Polycomb repressive complex
    109785724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ats03036]
    109785724
Enzymes [BR:ats01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109785724
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109785724
   HDAC complexes
    Sin3A-HDAC complex
     109785724
    BRAF-HDAC complex
     109785724
    REST complex
     109785724
    SHIP complex
     109785724
    MiDAC complex
     109785724
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109785724
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109785724
  Chromatin remodeling factors
   NuRD complex
    109785724
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109785724
NCBI-ProteinID: XP_020199907
LinkDB
Position
4:82062739..82064279
AA seq 471 aa
MDMGANSLPSPSCPDGRKRRVCYYYDPGISNVDYGEGHSMVPRRVAMAHSLVASYGLLND
MTRLRTRPASPEELLAFHDQKYVDLLGRLTPAAYMSDGNLRRTAEEHGIGPMRRLDGACT
NDNPVIDGLMGYCLSYAGGSLAAARALCGGDHDVAINWSGGMHHACRGHANGFCYVNDIV
LAIKQLLGRFRRVLYVDIDGHHGDGVEKAFADSNQVMTLSFHQYESQFFPGTGSIDDVGE
GAGRYHALNVPLKKGMDDQGYHELFKPIVGKAMQVFQPDAVVLQCGADSLSGDRLAGLEL
SVGGHAECVRYLRGFNAPLLLLGGGGYTINHVASCWCYETAVAVGKEDEIAHEIPHHPYD
HYYRSQGYRLQYRTEAPGSRSSGENKDAAVIRVKALEHLSAINCAPSIQFHEPCGAAAQG
MDVDDLCHHDDDDDDEEEADPMERLHLLCDNADLRGIFIELGRKRLSSQKC
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggatatgggcgccaactcgctgccgtcgccgtcgtgccccgacggcaggaagcggcgc
gtgtgctactactacgacccgggcatctccaacgtcgactacggcgagggacactcgatg
gtgccccgccgcgtcgcgatggcccactccctcgtcgcctcctacggcctcctcaacgac
atgactcgcctccgcaccaggccggccagcccggaggagctcctggcgttccacgaccag
aaatacgtcgacctcctcggcaggctcacccccgccgcgtacatgagcgacggcaatctc
cggcggacggccgaggagcatggcatcggccccatgcgccgcctggacggcgcctgcacg
aacgacaaccccgtcatcgacggcctcatggggtactgcctgagctacgccggcgggtcg
ctggccgcggcgcgcgcgctatgcgggggcgaccacgacgtcgccatcaactggtccggc
ggcatgcaccacgcgtgccggggccacgccaacggcttctgctacgtcaacgacatcgtg
ctcgccatcaagcagctgctcggccgcttccggcgcgtgctgtacgtggacatcgacggg
caccacggggacggcgtggagaaggccttcgcggactccaaccaggtgatgacgctgtcc
ttccaccagtacgaaagccagttcttccccggcaccgggagcatcgacgacgtcggcgag
ggggccggcaggtaccacgccctcaacgtgccgctcaagaagggcatggacgaccagggg
taccatgagctgttcaagccgatcgtgggcaaggccatgcaggtgttccagccggacgcc
gtggtgctgcagtgcggcgccgactcgctctccggcgaccggctcgctggcctcgagctg
tcggtgggcggccacgcggagtgcgtcaggtacctgcggggattcaacgcgccgctgctc
ctcctcggcggcggcggctacaccattaaccacgtcgcctcctgctggtgctacgagacg
gcggtggccgtgggcaaggaagacgagatcgcccacgagataccacaccatccgtatgat
cactactacaggagccagggttacaggctgcagtatcgcacggaggcgcccggcagccgc
agcagcggggagaataaggacgcggccgtcattagggtgaaagccctggagcacctctcg
gcgatcaactgcgcgccgagcatacagttccacgagccatgcggcgcggcggcccaaggc
atggacgtcgacgacctgtgccaccacgacgacgacgatgatgatgaagaagaagcagac
cctatggagaggctgcacctgctgtgcgacaacgcggacctccgcgggattttcatagaa
ttggggcggaagagactatcgtcgcaaaaatgctag

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