Aegilops tauschii (wheat D): 109786032
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Entry
109786032 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109786032
03015 mRNA surveillance pathway
109786032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109786032
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109786032
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109786032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
109786032
NCBI-ProteinID:
XP_020200197
LinkDB
All DBs
Position
5D:complement(558460681..558464588)
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AA seq
477 aa
AA seq
DB search
MAELEKKSPADVDDPKAIETAVDENQKKMEALSLLAPEDGGGGDGPPLLDDYDDDSQIQA
VASGGTVYESATTFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKNLVAQAH
NGSGKTTCFVLGMLSRVDPSRRIPQAICICPTRELAQQNKSVLMRMSKFTGITCASAISP
ALKDYMPISKMAPVTDQVVIGTSGTLIKWITNKKLATRDIKILVFDEADHMLAEENFMSD
SKRIMRDIQSSAGDCQLLLFSATFNEKVKDFITKVIKKGNQIFVKKEDLTLDKVKQYKVR
VPDEIAKIEVIRDKIFEFGQKVGQVIIFVRTKISTKNLHNALTKEDYVCSSIQGSLDHAE
REKVIQEFKDGYTKVLISTDLLARGFDQSQVNLVINYDMPIKYNSRDEPDYEVYLHRIGR
AGRFGRKGAVFNLLCGETDDILMTKIENYFQHKVQEVPSWESEENFETVLKDAGLLE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttggagaagaagtccccggccgacgtcgacgatccgaaggccatcgagacg
gcggtggacgagaaccagaagaagatggaggcgctctcgctattggcgccggaggacggc
ggcggcggcgacggaccgcctctgctggatgactacgacgacgactcccaaatccaagcc
gtggcgtccggcggcaccgtgtacgaatccgcgacgaccttcgaggacctgaagctcacg
ccggagctgctcaagggtctgcacgacgagatggggttcagccgccccagcaagatccag
gccgtcacgcttcccatgatcctcacgccaccctacaagaacctcgtcgcgcaggcgcac
aacggctccggcaagaccacctgctttgtcctcggcatgctcagccgcgtcgaccccagc
cgcaggattccccaagccatctgcatctgccctaccagggagcttgcgcagcagaataaa
tccgtgctcatgaggatgagcaagtttaccggcattacctgtgcctccgccatctcgccg
gctctcaaggattacatgcccatctccaagatggcaccggtgactgatcaggtggtgatt
ggcacttctgggactctcattaagtggataaccaataagaagcttgccacaagggacatc
aagattcttgtgttcgacgaggcagaccatatgcttgctgaggagaactttatgagtgat
tctaaaaggatcatgagggatatacagagcagtgccggtgactgccagctgcttctgttt
tctgcaaccttcaacgagaaagtgaaggattttattacaaaggtcattaagaagggaaac
cagatatttgtgaagaaggaagatcttactttggacaaagtaaagcaatataaagtccga
gtccccgatgagatagccaaaatagaggtcataagggacaagatctttgagtttggtcag
aaggttggacaggttatcatatttgtgagaacaaagataagtactaagaatcttcataat
gctttgacaaaagaggactatgtgtgttcctcaattcaaggatccctcgaccacgcagag
agggaaaaggtaatacaggaattcaaagatgggtacaccaaggttcttatatcaactgat
cttcttgcccgaggttttgaccaatcacaggtcaatctggtcataaactacgacatgcca
atcaagtataattctagagatgagcctgattatgaggtgtacctgcacagaattggcaga
gctgggcgctttggccgaaaaggagctgtgttcaacctgctatgcggtgaaactgatgac
attttgatgacaaagatcgagaactacttccagcataaagtacaggaggtccccagctgg
gagagcgaggagaattttgagactgttcttaaggatgctggtttacttgagtaa
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