Aegilops tauschii (wheat D): 109786473
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Entry
109786473 CDS
T04345
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109786473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109786473
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109786473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
PRP4
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR75_2nd
eIF2A
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
109786473
NCBI-ProteinID:
XP_020200639
LinkDB
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Position
2:131797860..131799836
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AA seq
516 aa
AA seq
DB search
MENPRPLPPAITPPMAPLPVHPPIAPVPVPVPPRAPASTSAAAGGGDDDEVDYEVSDDHR
AARERHERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEGAMERRDRLRALM
ARLEAEGQFDRLLRAQEDERGASGDDDDEGTEQIKYPFFTEGTNQLLQARIDIAMYSLPR
AKARVERAKRRLADPDEDPEAEAALVVKQAADFALERSEIGDDRPLTGCSFSRDASMLAT
SSWSGIVKVWSMPQIAKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNSDGSLLM
SFDGHLDRLARLAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPDG
SLAASCGFDASARVWDLRSGRLYCTLIGNVKPVLGVGFSPNGHLVATTSEDNFCRIWDLR
TRQMLYSIPAHKSLISHVKFEPQEGYYLATSSYDTKAALWSTRDYKPIKSLSGHESNVTS
LDISGDGQQIVTVSLDRTIKIWSCRGSARDNEMELD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccaggcccctaccccctgccatcacccctcccatggctcccctccccgtc
cacccacccatcgcccccgtccccgtccccgtgccaccccgcgcccccgcctccacatcc
gccgctgccggaggcggagacgatgacgaggtcgactacgaggtctccgacgaccaccgc
gccgcgcgggagcgccacgagcgcgccgtacaggagctcctgcagcgccggcgcgcctac
gccatggccgtgcccaccaatgactccgccgtgcgcgcgcgcctccgccgtctcggcgag
cccatcacgctcttcggcgagggcgcgatggagcgccgcgaccgcctgcgcgcgctcatg
gcccgcctcgaggccgagggccagttcgaccgcctcctccgcgcgcaggaggacgaacgg
ggagcctcgggcgacgacgacgacgagggcacggagcagatcaagtacccgttcttcacc
gaggggaccaaccaactgctccaggcgcgcattgacatcgccatgtactcactgccccgc
gccaaggccagggtcgagagggccaagcgacgcctcgccgaccccgacgaggaccccgag
gcagaggccgcccttgttgtgaagcaggcggcggacttcgcgcttgagcgcagcgagatt
ggagacgaccgcccgctcaccggctgctccttctcccgggatgcctcgatgctcgccaca
agttcctggagtgggatcgtcaaagtgtggagcatgccacagatagccaagattgcaacc
ctgaaaggccatacagaacgtgcaactgatgttgccttctccccagtcgacaactgctta
gcgacagcctcagctgataaaactgccaaattgtggaacagcgatggctcacttctgatg
tcttttgatggtcacctggatcgtcttgctcgccttgcttttcatccatctggaaagtac
cttggtacagctagctttgacaagacctggagattgtgggacatcaacactggaactgaa
cttctactccaggagggacatagcagaagtgtatatggtgtcagctttcacccagacggt
tctttagctgcatcttgtgggtttgatgcgagtgctcgagtttgggatttaaggtcagga
agattgtactgtaccctcattggaaatgtgaaacctgtcctaggagtcggcttctcccct
aatggtcatctggttgcaaccacaagtgaagacaatttctgtcgaatatgggatttgagg
accagacaaatgttatattctataccagcacataagagtctcatctcgcatgtgaaattc
gaaccccaggagggttattatttagcaacatcttcctatgacactaaagcagcgctatgg
tcaactcgggattacaaaccaattaaaagcttgtcaggccatgagtcaaacgttactagt
ctggatattagtggagatggacaacagattgtgactgtttcacttgatagaacgataaag
atctggtcatgcagaggcagtgcgcgggataatgagatggagttggattaa
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