Aegilops tauschii (wheat D): 109786490
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Entry
109786490 CDS
T04345
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109786490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ats04131
]
109786490
03029 Mitochondrial biogenesis [BR:
ats03029
]
109786490
Membrane trafficking [BR:
ats04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109786490
Others
Specific organelles associated proteins
Auto phagosome
109786490
Mitochondrial biogenesis [BR:
ats03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109786490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ATG16
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Vps52_CC
Beta-prop_DCAF12
DUF6923
WD40_like
Filament
DUF2120
SYCE1
Motif
Other DBs
NCBI-GeneID:
109786490
NCBI-ProteinID:
XP_020200651
LinkDB
All DBs
Position
5:476993294..476996619
Genome browser
AA seq
681 aa
AA seq
DB search
MAGHQNQLRDEGRGGEGNAHLRAEHGTWLGGVEDGGGRGFRREARRRGRRRCRSRSLVKT
VRRVVAKAGIFRPIRISLGPFCFRGGFQAQLLLQPVSESSPPYERPSPYRTGRAPFAART
RHPIGFVPLSLSSSSPPKSVALAAAPRTAGHATSAADAADGIDASMTQAEADAGKAAIQR
ALRALRQRHLVEEGAHRPAIEALNRPFAAHALEWKEKAEKNELELQQCYKAQSRLSEQLV
SEINEAKTSKALLKEKEALITALQSELQQTSEENVQLKQSLEEKTNALDLLVQEHQAAKA
ELERVLTKLKAVEHENTQLVERLMQAKMVEAEKLNEANAMYEEMVLKLKAAGLGAGGIQH
HAQQEADGVIRRSEAGYVDIMETPIPSTCRITIRAHDGGCGSIIFQNNTDKLISGGQDQT
VKIWSAHTGALTSTLQGCLGTVNDLAVTNDNKFVIAACSSNKLFVWEVNGGRPRHTLTGH
TKNVCSVDASWVKSLVIASSSNDRTIKIWDLQTGFCKSTIMSASNPNTLAFIHGDAICSG
HRDGSLKFHDIRSGKCFATVAAHIDVSSICVTRSKNHVLSSGREGVHKLFDVRMPTEVVE
ICGTFRAPSNRLVGSWGRACISPDENCIASGSSDGSVCIWSRSKNEGPTILEGHSLPVVT
SAWSEFGPLATADKNHIHIWA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcaccagaaccagctccgcgacgaggggcgggggggtgaggggaatgcgcac
ttacgtgcggagcacggcacgtggttgggtggggtggaagacggaggcggccgtggcttt
cgccgggaagcgaggcggcgtgggaggcggagatgccgctcgcggtcgctggtcaagacg
gttcgtcgcgtggtcgccaaggccggaatattccgccccatccgcatctcgctcggccca
ttttgcttccgaggtgggtttcaggcccaactcctcctccagcccgtatccgagtcgagc
ccaccttacgagcgtcccagtccatatcgaaccgggcgggctcccttcgcggcccggaca
cgccaccccatcggcttcgttcctctttcgctttcgtcttcctctccacccaagtcagtc
gccctcgccgcggcgccccgcaccgccgggcacgccacctccgccgccgacgccgccgac
gggatcgacgcgagcatgacgcaggcggaggcagatgccggcaaggcggccatccagcgc
gcgctgcgggcgctgcggcagcggcatctcgtcgaggagggggcccaccgccccgccatc
gaggcgctcaaccggcccttcgccgcccacgctttggagtggaaagagaaggccgagaag
aacgagttggagctgcagcagtgctacaaggctcaatcccggttgtctgagcagctcgtt
tccgagataaacgaggcgaaaacgtccaaagcgctgctcaaagagaaggaggcactgatt
acggctttgcagagtgaacttcagcagactagcgaagagaacgtacagctaaaacagtca
cttgaagagaagacaaacgctttagatcttctcgttcaggagcaccaggcggctaaagcc
gaacttgaacgggtgctaacaaaacttaaagctgtggagcatgagaacacacagctggtt
gagcgattgatgcaagcgaagatggtggaggcagagaagcttaatgaggccaatgcgatg
tatgaggagatggtcctaaagctaaaggcagctgggcttggcgctggcggaatacaacac
catgcacaacaagaagctgatggcgtcattcggcgatccgaagctgggtatgttgacatc
atggaaacaccaatcccatctacatgcaggatcaccatccgtgctcatgatggtgggtgt
ggatctataatattccagaataacacagataagctaatcagtggtggccaggatcaaact
gtcaagatatggtctgcgcatactggtgctttaacctccactctgcagggttgcttgggg
actgtcaacgatcttgctgtgaccaatgataacaagtttgtaattgccgcctgtagctct
aacaagttgtttgtatgggaagttaatggggggcgtcctcgtcacactctgactggccac
acaaaaaatgtctgttctgtagacgcaagctgggtgaaaagtttggtcattgctagttca
tccaatgaccgcactatcaagatctgggatctccagactggcttctgtaaaagcaccata
atgtcagcaagcaaccccaatacactagctttcatccatggcgatgccatttgctcaggt
catagggatggaagcctaaagttccatgatatccgcagtggaaaatgttttgccacggta
gcagctcatattgatgtcagctcgatctgtgtaacccggagcaaaaaccatgttctttca
agtgggagagagggcgtgcacaagctttttgatgttagaatgccgacggaggtagtggag
atttgtggaacattcagggccccgagtaacagattggttggcagctggggcagagcttgt
ataagcccggatgagaactgcatagcgtctggctcctctgatgggtctgtttgcatatgg
tcgagatcgaagaacgaggggccgaccatcctagagggccactcattgccggttgttaca
agtgcatggtctgagtttggacctcttgccaccgccgacaagaatcatattcatatatgg
gcttga
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integrated database retrieval system
