Aegilops tauschii (wheat D): 109786675
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Entry
109786675 CDS
T04345
Name
(RefSeq) pre-mRNA-processing factor 39-1
KO
K13217
pre-mRNA-processing factor 39
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109786675
Spliceosome [BR:
ats03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109786675
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_MalT
SWIRM
DUF6171
Motif
Other DBs
NCBI-GeneID:
109786675
NCBI-ProteinID:
XP_020200838
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All DBs
Position
6:16404280..16412074
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AA seq
782 aa
AA seq
DB search
MENPDGQAGADAGLPPPPPPPLDAAGAGLGSDPAEVLPPPPPHLPGGAPHEVAAQGADGS
AYPAEHASLNGTSGDAAGYQATENGAAADEMAEPMVPEQSYEDAVASAEEARLWDVVTAD
CLDFDAWTALIEETERIAESNILKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNKVF
EVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTDYRSNTLWDEYIK
YEESLQAWSNLAVVYTRILEHPIQQLDRYFNCLKELTATRSLSEILTAEETSMYCLTVEN
SAQVLDGEAHPNDVEKTAEPEVSSSTEAEDKAKYVSIREELFRKAKEYESKIFNFEQAIR
RPYFHVKPLDKPELENWHSYLDFIEKEEDINKVIKLYERCVIACASYSEFWIRYVQCMED
RQSLELANNALARATHVFVKKQTEIHLFSARFKELNGDTDGARAEYQHLHSVLYPGLLEA
IVKHANMEHRLGDKESACLVYEKAIAAEKEKEQSQLLPMLLIQYSRFLYMVGDLEKAREI
SGGLHGLANLTKPVLEAVIFLESIFQSEKRIDLLESLVEKFLTAEQTQGELASLSDKEEL
SSIYLEFLDTFGDVQSIKKATTRHTILFSRKRSILPSKKRRADDAVMSGRDKMAKTGDGT
QPGMGTDPNAHNPAVWPATSEASAQQWGAAYAQQAAYPAYGAYDYSQQMPQSAPQAAAYG
AYPPTYPAQAYPQQSYAQPAAMPVAAAVPTPAQAPAPAAAYPQQPAVAAAPQAYYGGAAT
YY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccgacgggcaagcgggagccgacgcggggcttcccccgcccccaccgccg
cccctggacgccgcgggggcgggcctgggcagcgacccggccgaggttctcccaccgccg
cccccgcatctcccggggggcgccccgcacgaagtcgcggcgcagggggccgacggatcc
gcgtacccggccgagcacgcctcgctgaacgggacctccggcgacgcggcgggctaccag
gccacggagaacggcgccgccgccgacgagatggccgagcccatggtgcccgagcagtcg
tacgaggatgctgtggcttcagcagaagaggctaggttatgggatgttgtcaccgcggac
tgcctggactttgatgcttggaccgcgcttattgaggagacggagaggatcgctgagagc
aacatattgaagatacgcaaagtgtatgatgccttccttgcggagttccctctgtgcttt
ggctattggaagaaatatgcagatcatgaaggccgtctggatggtgtcaataaagttttt
gaggtgtatgaacgggcagttcttgcagttacttattcagtggacatatggtgtaattat
tgtcagtttgcgatttcaacatacaatgacccagatgtcatcagaagactgtttgatcgg
ggtttggcatatgttggaacagattatcgttccaatactttgtgggatgagtacatcaag
tatgaagaatcacttcaagcatggagtaatctagctgtggtatacacaagaatattagag
caccctatacagcagcttgatcggtactttaattgcttgaaggagttaactgcgacacgg
agcctgtcagaaatacttactgctgaggaaacttccatgtattgtcttactgttgagaat
agtgctcaggtccttgatggggaggcacatcctaatgatgtagaaaaaactgcagagcct
gaagtttcatcttcaacagaagcagaggacaaagcaaaatatgtttccattagagaagag
ttgtttaggaaggccaaagagtatgaatctaagatttttaattttgagcaagctattaga
agaccatactttcatgtcaagcctcttgacaaaccagagcttgaaaattggcacagctat
cttgattttatcgagaaggaagaagacattaataaggttatcaagttatacgaaagatgt
gttattgcttgtgctagttattcagaattctggatccgctatgtgcaatgcatggaggat
agacaaagcctagaactagcaaacaatgctcttgctcgtgccactcatgtgtttgtcaag
aagcagacagagatccatctgttcagtgcaagattcaaggagcttaatggcgatactgat
ggagcacgtgcagagtatcaacatctccactcagtgttatatcctggcctcctcgaagcc
attgtgaagcatgctaatatggagcaccggctgggagataaggaatctgcttgtttagtc
tatgagaaggccattgctgctgaaaaggagaaggagcagagccagcttttaccaatgcta
ctgattcagtactcacgtttcttatatatggtcggtgacttggaaaaggcaagggagatc
tcaggtggactgcacgggctagctaaccttactaaaccagttcttgaggctgtcatcttt
cttgagtcgatctttcagtctgagaagcgtattgatttgttagaatcactggtagaaaag
tttcttacagctgaacagactcaaggggagctggcaagcttaagtgacaaagaagaatta
tcttccatatatttagagtttttggatacgtttggggatgtacagtcaatcaagaaggct
acaactcgacatactattctcttttcacgtaaaaggagcattctgccatcaaagaaacga
agagcagatgatgctgtcatgtccggtagagataaaatggccaaaactggagatggcacc
caaccaggcatgggaactgatccaaatgctcataatcctgcagtttggcctgcgacttct
gaagcatcagcgcagcaatggggggctgcttacgcacagcaggctgcttatcctgcatat
ggagcttacgactacagccaacaaatgccccaatctgctcctcaagcagccgcttatggt
gcctatcctcccacataccctgcccaggcctacccgcagcagagctacgcacaacctgca
gcgatgcccgtggcagcagcagtgcccaccccagcacaggcaccagcacctgcagcagcc
taccctcagcaacctgccgtggctgccgccccccaagcttactacggcggcgccgccacg
tactactga
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