Aegilops tauschii (wheat D): 109787314
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Entry
109787314 CDS
T04345
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109787314
09122 Translation
03013 Nucleocytoplasmic transport
109787314
03015 mRNA surveillance pathway
109787314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109787314
03041 Spliceosome [BR:
ats03041
]
109787314
03009 Ribosome biogenesis [BR:
ats03009
]
109787314
03012 Translation factors [BR:
ats03012
]
109787314
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109787314
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109787314
mRNA cycle factors
Stress granule specific factors
109787314
Spliceosome [BR:
ats03041
]
Complex C
Other components
EJC/TREX
109787314
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
90S particles
Helicases
109787314
Translation factors [BR:
ats03012
]
Eukaryotic type
Initiation factors
eIF-4
109787314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
AAA
Helicase_RecD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
109787314
NCBI-ProteinID:
XP_020201470
UniProt:
A0A453Q7U2
LinkDB
All DBs
Position
6:494480660..494485362
Genome browser
AA seq
413 aa
AA seq
DB search
MAAAAGGATTSTRRGPGGGGRPMDDENLTFETSAGVEVVGSFDAMGIREDLLRGIYGYGF
EKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSMISLSVCQVIETNVHEVQALILSPTREL
ATQTERVMQAVGNFMSVSVHACVGGKSIGEDIRKLESGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVR
ILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMR
TNNFTVSAMHGDMPQKERDAIMSEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggcggcgcgacgacctcgacgaggcgcgggccgggcggcgggggc
cggccgatggacgacgagaacctgaccttcgagacctccgcgggggtggaggtcgtgggc
agcttcgacgccatggggatccgcgaggacctcctccgcggcatctacggctacggcttc
gagaagccctccgccatccagcagcgcgccgtcatccccatcatcaccggccgcgacgtc
atcgcgcaggcccagtccggcaccggcaagacctccatgatctccctctccgtctgccag
gtcatcgagaccaacgtccacgaggtgcaggcgctgatactgtcgccaactagggaactg
gcgacgcaaacagagagggtgatgcaggctgttggtaactttatgagcgtctctgtgcac
gcctgtgttggtggcaaaagtatcggcgaggacattaggaagctcgagtctggagtgcat
gttgtttcaggaaccccgggcagagtatgtgatatgatcaagagaaggaccttgcgcaca
agggccatcaagctcctagtcctggacgaagccgatgagatgttgagcagaggtttcaag
gatcagatatatgatgtctacagatatcttcccccagaacttcaggttgttttgatctct
gcaactttgccccatgacatcttggagataactagcaagttcatgactgatccagtcagg
atccttgtaaaacgtgatgagttgaccctagagggcatcaaacaattctttgttgctgtt
gagaaagaggaatggaagtttgatacactgtgcgatctttatgatacacttaccatcacc
caagctgtcattttctgtaacactaagagaaaggtggattggcttactgaaaggatgcgc
accaacaacttcacggtgtcagctatgcacggtgacatgcctcagaaggaaagggatgcg
atcatgagtgagttcaggggtggcacgacccgtgttctgatcacaaccgatgtttgggct
cgagggctggatgtccagcaggtctctcttgtcattaattacgatctccccaacaaccgt
gagctttacatccatcgtattggtcgctctgggcgtttcgggcgcaagggtgtggcgatc
aactttgtgcgcaaggatgacatccgtatccttcgggacatcgagcagtactacagcacg
cagatcgacgagatgcccatgaacgtcgccgatcttatctga
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