KEGG   Aegilops tauschii (wheat D): 109787643
Entry
109787643         CDS       T04345                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03013  Nucleocytoplasmic transport
ats03015  mRNA surveillance pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109787643
  09122 Translation
   03013 Nucleocytoplasmic transport
    109787643
   03015 mRNA surveillance pathway
    109787643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109787643
   03041 Spliceosome [BR:ats03041]
    109787643
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109787643
    TREX complex
     109787643
Spliceosome [BR:ats03041]
 Complex C
  Other components
   EJC/TREX
    109787643
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109787643
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 109787643
NCBI-ProteinID: XP_020201767
LinkDB
Position
5:complement(268701644..268704279)
AA seq 276 aa
MADALDMSLDDLISKNKSSSQRGRGRRNPASGSGSGSASGGPAPAGRRFQARAATRAAAA
PYHQFNFQPPAPAVFAYAAQQAHAHAHAQAMAMVAPPTGVETGTKLYISNLDYNVSNEDI
KELFAEVGDLKRYSINYDKSGRSKGTAEVIFSRKSDALAALKRYNNVQLDGKPMKIEVIG
TNIEAPPPPAIFTLNTPTIGNFIPSYSGGRGRGGDGGRGWPRGRGGFGGRSAAGRGRGRG
DVGRGRGRGGRGSQPVSANDLDADLDKYHSEAMQTS
NT seq 831 nt   +upstreamnt  +downstreamnt
atggcggacgccctggacatgtccctcgacgacctcatctccaagaacaagtcatcctcc
cagcgcggccgtggccgccgcaacccggcctcgggctcgggctctggctccgcgtcgggg
ggacccgcacccgccggccgccgcttccaggctcgcgccgccacccgcgctgccgccgcg
ccctaccaccaattcaacttccagcccccggcgccggcggtttttgcatatgctgcccag
caggcccatgcccatgcccacgcccaggcgatggccatggtggcgccgccgaccggggtc
gaaacgggcaccaagctgtacatctccaacctcgactacaatgtctccaacgaggacatc
aaggaactctttgctgaggtgggcgatctcaagcggtactccattaactacgacaagagt
gggagatcaaagggaactgcagaggttatattttcaaggaaatcggatgctctagctgct
ctaaagaggtacaacaatgtgcagcttgacggcaaacctatgaaaattgaggtcattgga
acaaatattgaggcaccaccaccacctgctatttttactttgaataccccgacgatagga
aacttcattccttcctacagtggcggacgtggaaggggcggtgatggtggtcggggatgg
cctcggggcagaggtggattcggcgggcgtagtgctgcagggcgtggtcgagggcgcggt
gatgttggccgtgggcgagggaggggagggcgtggcagtcagccggtttctgccaatgat
ctagacgcagacttggacaagtaccactcggaggcgatgcagaccagctaa

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