Aegilops tauschii (wheat D): 109787643
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Entry
109787643 CDS
T04345
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109787643
09122 Translation
03013 Nucleocytoplasmic transport
109787643
03015 mRNA surveillance pathway
109787643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109787643
03041 Spliceosome [BR:
ats03041
]
109787643
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109787643
TREX complex
109787643
Spliceosome [BR:
ats03041
]
Complex C
Other components
EJC/TREX
109787643
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109787643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
109787643
NCBI-ProteinID:
XP_020201767
LinkDB
All DBs
Position
5:complement(268701644..268704279)
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AA seq
276 aa
AA seq
DB search
MADALDMSLDDLISKNKSSSQRGRGRRNPASGSGSGSASGGPAPAGRRFQARAATRAAAA
PYHQFNFQPPAPAVFAYAAQQAHAHAHAQAMAMVAPPTGVETGTKLYISNLDYNVSNEDI
KELFAEVGDLKRYSINYDKSGRSKGTAEVIFSRKSDALAALKRYNNVQLDGKPMKIEVIG
TNIEAPPPPAIFTLNTPTIGNFIPSYSGGRGRGGDGGRGWPRGRGGFGGRSAAGRGRGRG
DVGRGRGRGGRGSQPVSANDLDADLDKYHSEAMQTS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccctggacatgtccctcgacgacctcatctccaagaacaagtcatcctcc
cagcgcggccgtggccgccgcaacccggcctcgggctcgggctctggctccgcgtcgggg
ggacccgcacccgccggccgccgcttccaggctcgcgccgccacccgcgctgccgccgcg
ccctaccaccaattcaacttccagcccccggcgccggcggtttttgcatatgctgcccag
caggcccatgcccatgcccacgcccaggcgatggccatggtggcgccgccgaccggggtc
gaaacgggcaccaagctgtacatctccaacctcgactacaatgtctccaacgaggacatc
aaggaactctttgctgaggtgggcgatctcaagcggtactccattaactacgacaagagt
gggagatcaaagggaactgcagaggttatattttcaaggaaatcggatgctctagctgct
ctaaagaggtacaacaatgtgcagcttgacggcaaacctatgaaaattgaggtcattgga
acaaatattgaggcaccaccaccacctgctatttttactttgaataccccgacgatagga
aacttcattccttcctacagtggcggacgtggaaggggcggtgatggtggtcggggatgg
cctcggggcagaggtggattcggcgggcgtagtgctgcagggcgtggtcgagggcgcggt
gatgttggccgtgggcgagggaggggagggcgtggcagtcagccggtttctgccaatgat
ctagacgcagacttggacaagtaccactcggaggcgatgcagaccagctaa
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