Acinetobacter sp. TTH0-4: AMQ28_01780
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Entry
AMQ28_01780 CDS
T04075
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att02024
Quorum sensing
att03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMQ28_01780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMQ28_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
att03019
]
AMQ28_01780
03036 Chromosome and associated proteins [BR:
att03036
]
AMQ28_01780
Messenger RNA biogenesis [BR:
att03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMQ28_01780
Chromosome and associated proteins [BR:
att03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AMQ28_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ALD01199
UniProt:
A0A0M4GQ00
LinkDB
All DBs
Position
complement(366110..366652)
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AA seq
180 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGTQGAAGGFSGQQGTQPGGFGGQGGGFGGQGGGFGGQGGFGGGSQ
GGFGGQGGGFGGQGGFGGQGGGFGGQGGFGGAPGGFGGQSNTGFDGETKFEDSQDDENNR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccattcttgaattctcttcgtaaggaacgtatt
cctgtttctatcttcctagtgaacggtattaaattacaaggtcatattgaatcttttgac
cagtatgttgttttgctgaaaaacactgtaagccaaatggtttataaacatgcgatctct
accgtagttcctgcacgtaatccacgtcctgctggtgctcctgctggtactcaaggcgct
gctggtggtttcagtggtcaacaaggtacgcaaccaggcggcttcggtggtcaaggtggt
ggttttggcggtcaaggtggtggttttggcggtcaaggtggctttggtggtggttcacaa
ggtggctttggtggtcaaggtggtggttttggcggtcaaggtggctttggtggtcaaggt
ggcggttttggcggtcaaggtggctttggtggtgcaccgggcggctttggtggtcagtct
aatactggttttgatggtgaaactaaatttgaagattcgcaagatgacgaaaataatcgt
taa
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