Acinetobacter sp. TTH0-4: AMQ28_02865
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Entry
AMQ28_02865 CDS
T04075
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMQ28_02865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
att03400
]
AMQ28_02865
DNA repair and recombination proteins [BR:
att03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMQ28_02865
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMQ28_02865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
SWI2_SNF2
AAA_22
DUF87
AAA
Microtub_bd
AAA_7
AAA_5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALD01389
LinkDB
All DBs
Position
complement(590367..592391)
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AA seq
674 aa
AA seq
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MQDTPQPFELVTSYQPAGDQPQAIEKLVSGIKKGYHDQLLLGVTGSGKTYTMANVISQLQ
RPTIVMAHNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSAIND
HIDQMRLSATRSLLERRDAIIVASVSAIYGLGDPNAYMSMLLHIVQGDRISRDDLIRRLV
EMQYSRNELEFLRGTYRIRGEIMDIFPAESDQNAIRIELFDEEVDSIRWFDPLTGKMVRK
VPRVTIYPKSHFVTPKDNLQRAIGTIREELKDRLAFFKQHDKLLEAQRIEQRTRYDLEMM
QQLGYTNGIENYSRHLSGRPSGEAPPTLFDYIPDDALLIIDESHVTVPQIGAMYKGDRSR
KENLVNYGFRLPSALDNRPMQFEEWERIVPTTIYVSATPAKYELEKSEQIAEQVVRPTGL
IDPEIEVRPVLTQVDDVLSEINLRKDLDERVLVTTLTKRMAEDLTSYLKEYGVKVAYLHS
DIDTVERVKIIHELRSGVHDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNVKGKAILYADRITDSMRKAIDETDRRRNKQIEFNTLHGIIPRSTKRQNNKDID
TGEVLTDDQIDENISSQARALSADERHILADPKLLAKHMSKLEKEMLKASKELQFEQAAR
LRDEIVRLKAQMLS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatactccgcaaccttttgaattggtcaccagctatcaacctgcaggtgatcag
ccacaagccatcgaaaaattagtcagtggcataaaaaaaggttatcacgaccagttattg
ttaggggtaacaggttcgggtaaaacctataccatggccaatgtgatttcacagctacaa
cgtccaaccattgtgatggcgcataataaaaccttggcggcacagttgtatggggaattt
aaatccttttttcccaacaatgcggttgaatatttcgtcagttattatgactattatcaa
cccgaagcgtatgttccatcttcagatacctttattgaaaaagattcagctatcaatgat
cacattgaccagatgcgtctttctgcaacacgttcattattagaacgccgtgatgccatt
attgtagcctcggtttctgcaatttacggtttaggtgatccgaatgcttatatgagtatg
ctgttgcatattgtccaaggtgaccgaattagtcgtgatgacttgattcgtcgtttggtt
gaaatgcaatatagtcgtaatgaactcgagtttttacgcggtacgtatcgtatacgcggt
gaaattatggatatttttcctgccgaatcggatcaaaatgccattcgtattgaactgttt
gatgaggaagtggattctattcgttggtttgatcctttaacgggcaaaatggtacgtaaa
gttccgcgagtgacgatttacccaaaaagtcatttcgttacaccaaaagataacttgcag
cgtgccataggcactattcgtgaggagctcaaagatcgtttggctttttttaaacaacat
gacaaattattggaagcacaacgaattgaacaacgcacccgttacgatttagaaatgatg
caacagttgggttataccaacggaattgaaaactactcaagacatttatccggtcgtcca
tcgggtgaagcgccaccgacattatttgattatattcctgatgatgctctactgattatt
gatgagtcacatgtgactgttccgcaaattggtgcaatgtacaaaggtgaccgttcacgt
aaagaaaacttagtgaattatgggtttcgtttgcctagtgcgctagataaccgtccaatg
cagtttgaagaatgggaacgtattgtaccgaccacgatttatgtcagtgcaacacctgcc
aaatatgaattggaaaaatcggaacaaatagccgagcaggtggttcgtcctacaggtttg
attgatcctgaaattgaagttcgtccagtcttaacccaagtcgatgatgtactttcggaa
attaatctgcgtaaagatttagatgagcgtgttttagtgacaactttgacgaaacgtatg
gcagaagatttaacctcttatttaaaagaatatggggtgaaagtcgcttatttgcactca
gacattgatacagttgagcgtgtcaaaattattcatgaattacgttctggtgtgcatgat
gtgctcgtgggtattaatttattacgagaaggtctggatatgccagaagtatctttggtg
gctattcttgatgccgataaagaaggatttttgcgttcggagcgttcactcattcaaaca
ataggtcgagctgcacgtaatgtgaaaggaaaagcgattttatatgctgaccgaattaca
gactccatgcgaaaagcaattgatgaaaccgaccgtcgtcgtaataagcaaatcgagttt
aatacattacatggcattataccgcgcagtacgaaacgtcaaaataataaagatattgat
actggtgaagtactaacggacgatcaaattgacgaaaatatttcaagtcaggcgcgcgcg
ttaagtgcggatgaacgacatattttggccgatccgaaattgctggctaaacacatgtca
aaactggaaaaggagatgttaaaagcatcgaaagaattacagtttgaacaggctgccaga
ttacgtgatgagattgttcgcttaaaagcccaaatgttgagttag
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