Acinetobacter sp. TTH0-4: AMQ28_05270
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Entry
AMQ28_05270 CDS
T04075
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMQ28_05270 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
att03021
]
AMQ28_05270 (rho)
03019 Messenger RNA biogenesis [BR:
att03019
]
AMQ28_05270 (rho)
Transcription machinery [BR:
att03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AMQ28_05270 (rho)
Messenger RNA biogenesis [BR:
att03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMQ28_05270 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Sulfotransfer_1
AAA_22
OB_RNB
NACHT
AAA_25
S1CSD-TOTE-2
AAA
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ALD01822
LinkDB
All DBs
Position
1109915..1111183
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYISPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLIMELGNGTSEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHRKDVVILLDSITRLARAYNTVIPSSGKVLTGGLDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRISEKRVFPAMNI
KKSGTRREERLMSEDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
TS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactgaactcaagaaaaaaccgattggcgaactcatcaaaattgccgagttt
atgggcctagaaggcatggctcgtaaccgtaagcaagacatcatttttgccatcttaaag
cgccatgccatgaatggtgaagagatttttggtgatggtgttttagaaattctatctgat
ggttttggtttcctccgctctgcagcaggttcttaccttgctggaccagacgatatttat
atcagcccatctcaaattcgtcgctttaatttacgtacaggtgacaccattacaggtacg
attcgcccacctaaagagggtgaacgttatttcgctttattaaaagtgaatcaaattaac
tatgacacacccgaaaattcacgtaataaaattttatttgaaaacttaacacctttattt
ccaactgaacagttgattatggagttagggaatggtacctcagaagatttaaccgcacgt
gtagtcgacttggtagcaccaatcggtaaaggtcaacgttcaattattgttgctccgcct
aaagcgggtaaaacaatgttgttgcagaatattgctcaatcaattgtccgtaataatcct
gaagtattcctgattgttcttcttattgatgaacgaccagaagaagtcaccgaaatggaa
cgtacagttcgtggtgaagtggttgcatcaacatttgatgaagctcctgctcgtcacgtg
caagttgctgaaatggtgattgaaaaagctaaacgtctagttgaacatcgtaaagatgtc
gtcattttactggattcaattactcgtttagcgcgtgcttataacacggtcattccatct
tctggcaaagtattgacaggtggtttagatgcacacgcactagaacgtcctaaacgcttc
ttcggtgctgcacgtaatattgaagaaggtggttcactcaccattatttctacagcctta
attgaaactggcagtaaaatggatgatgtgatctatgaagaatttaaaggcacaggtaac
caagaaattacgcttgatcgtcgtatttctgagaaacgtgtcttccctgccatgaatatc
aaaaaatcgggaactcgtcgtgaagaacgtctgatgagtgaagacaatttacgtaaagtt
tggattttacgtaagcttcttcaccctatggatgaacttgcagcaatggagtttttacta
gatcgtatgaaagaaaccaaaaccaatgatgatttctttgatcaaatgaaacgtaaagca
accagttaa
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