Acinetobacter sp. TTH0-4: AMQ28_09430
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Entry
AMQ28_09430 CDS
T04075
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMQ28_09430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
att03021
]
AMQ28_09430
03400 DNA repair and recombination proteins [BR:
att03400
]
AMQ28_09430
Enzymes [BR:
att01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMQ28_09430
Transcription machinery [BR:
att03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMQ28_09430
DNA repair and recombination proteins [BR:
att03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMQ28_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALD02553
UniProt:
A0A0M3RLN8
LinkDB
All DBs
Position
1983658..1987857
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIDLASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPMEKYQLLNDEEYFTALEEHGDE
FSAKMGAEAIQDLLKDIDLENEISRLREEIPQTTSETKLKKASKRLKLMEAFKESNNKPE
WMVLTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLAHV
IRQHPVMLNRAPTLHRLGLQAFEPTLIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTDEVNR
ALATGQVDLHARVKARVHQTVIDEDGNREDQTIIVDTTPGRCLLWEVVPKGMDFQQINLE
MNKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPNKQAIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSFTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTLSGLVMTPFIQGGDVIENL
GARVLGRVVAEDVTRVGSEEVLLPRNTLIDEKLAAFIEEAGVDEVKVRSVVSCESTFGVC
AKCYGRDLARGHQVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSIQVRNK
GTVRFHNVKTVEHIKGHLVSTSRSGEIGIADDLGRERERYKIPYGASIILKDGEAVAAGG
IVATWDPHTHPLVTEVAGKVRFSQIADGVTVTSKTDDATGMSTIEILPVTSRPASGKDLR
PAVVLDTVEGGEQFYFLPQNTILSVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEISGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTMNVYEGEHV
NRGETVSDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
EITDGGDTSFIKGEQVDYIRMVAENQAVLAQNKFPAKYERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDELRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELVND
FSDVDQALSQAFSDEFNGL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttgctcgatatcatgcgcaaaaagacggattcagatggtcatgcaccagtt
gaatttgatcgtatccgtattggtcttgcgtcaccagaaatgatcaaatcatggtctcat
ggtgaagttaaaaagccagaaaccattaactaccgtacttttaaaccagaacgtgacggt
ttattctgtgccaaaatttttggaccagtcaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtcaccactgca
aaagttcgtcgtgagcgcatgggtcatattgatcttgcatctccagtggcacacatttgg
ttcttgaaatcattaccatcccgtatcggtcttcttttagacatgacgttacgtgatatc
gaacgcgtattgtatttcgaatcatacgttgtgactgatccgggtatgactccaatggag
aaataccaacttctaaatgatgaagaatatttcactgcgttagaagaacatggtgatgaa
ttcagcgcgaaaatgggtgcagaagcgattcaagatttgttgaaagacatcgatcttgaa
aacgaaatttcgcgtcttcgtgaagaaattccacaaacaacgtctgaaacgaagcttaaa
aaagcgtctaagcgtttgaaattgatggaagcattcaaagagtcgaacaacaaaccagaa
tggatggtgttgactgtacttccagtactaccacctgatcttcgtccgttggttccgctt
gaaggtggtcgtttcgcgacttctgatttgaacgatctttatcgtcgtgtgattaaccgt
aacaaccgtttaaaacgtcttcttgatctttcagcgccagacattatcgtacgtaacgaa
aaacgtatgctgcaagagtctgtggatgcattgttagataacggtcgtcgtggtcgtgca
attacgggttcgaacaaacgtccgcttaaatctttggctgatatgatcaaaggtaagcaa
ggtcgtttccgtcaaaacttattgggtaaacgtgtcgactattcaggtcgttcagtgatt
accgtaggtccgactttacgtttgcatcaatgtggtcttccaaagaaaatggcacttgag
ttattcaaaccatttatttttgcgaaactacaagcttcgggtcaagccaccaccattaaa
gctgcgaagaaaatggttgagcgcgagactccagaagtttgggacgttttagctcacgtg
attcgtcaacatccagtgatgttgaaccgtgcgccaactcttcaccgtttgggtcttcaa
gcatttgaaccgaccttgattgaaggtaaagcgatccgtcttcacccactcgtatgtgct
gcgttcaacgccgacttcgatggtgaccaaatggcggtacacgtaccattaacgttagaa
gcgcaattagaagcgcgtgcgttaatgatgtcgaccaacaatatcttgtctccagccaac
ggtgagccaatcatcgtaccttctcaagacgtggtcttgggcttgtattacatcacacgt
gatgcaatcaatgccaaaggtgagggcatggtatttgcagatactgatgaagtaaaccgt
gcacttgctaccggtcaagtggatttacatgctcgcgttaaagcacgtgtacatcagact
gtgattgatgaagacggtaatcgtgaagatcaaacgattattgttgatactacgccaggt
cgttgtttactttgggaagttgtgcctaaagggatggacttccagcaaattaatcttgag
atgaataaaaagaacatctcgaagttgattaactcttgctaccgtaaattgggtctgaaa
gatactgtaatctttgcggatcaattgatgtacttgggcttccgtcaagcgacgcgttca
ggcgtatctgtcggtatggaagacatgcttattccaccgaataagcaagcgattattgat
aaagctgaaactgaagttcgtgaaattgaacaacagtttgaacaaggctttgtgactgct
ggcgagcgttataacaaagtggtcgatatttgggcacgtaccaatgaccaagtagcgaaa
gcgatgatggacaacttgtctttcacgactgttaaaaacaaacagggtgaagatgagaag
cagaaatcatttaatagtatctacatgatgtctgattctggtgcccgtggttcggcagcg
cagattcgtcagcttgcaggtatgcgtggtctaatggcgaaaccagatggttcgatcatt
gaaaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatttca
acacatggtgcacgtaaaggtttggccgataccgcacttaaaactgcaaactcaggttac
ttgacacgtcgtttggtcgatgtcgcacaagatttggtgattactgaacctgattgcggt
actttaagtggtcttgtaatgacaccgttcattcaaggtggcgatgtcatcgaaaactta
ggtgcacgagtattaggtcgtgttgttgcagaagatgtgacgcgcgttggttcagaagaa
gttcttctgccgcgtaatactttaattgatgaaaaacttgctgcctttattgaagaagca
ggcgtggatgaagttaaagtacgttcagtcgtatcttgtgaatcgaccttcggtgtatgt
gcgaaatgttatggtcgtgatcttgcacgtggccatcaggtgaatcctggtgagtcggtt
ggtgtaatggctgcacaatctattggtgaaccgggtacccagttaaccatgcgtacattc
cacgtgggtggtgctgcaagccgaacatctgctgccaacagtatccaagtacgtaacaaa
ggtacagtacgtttccacaatgtgaaaactgtagaacatatcaagggtcacttggtgtct
acgtctcgttcaggtgaaattggtattgccgatgacctaggtcgtgaacgtgaacgttac
aaaatcccatatggtgcttctattatcttaaaagatggtgaagctgtcgctgcaggcggc
atcgttgctacttgggatccgcatacgcatccactggtaactgaagttgcaggtaaagta
cgtttcagccaaatcgctgatggcgtaactgtaacctcaaaaactgatgatgcaacagga
atgagcacgattgaaatcttaccagtgacttctcgtcctgcgtcaggtaaagatttgcgt
cctgcagttgtactcgatacagttgaaggcggtgagcagttctacttcttaccacaaaat
acgattctttctgtccgtgatggcgaaacaattggtgttggtgacgttattggtcgtgta
cctcaggaaacttcacgtactcgtgatattaccggtggtctgccgcgtgtagctgacttg
ttcgaagcacgtaaaccgaaagagcatgcaattcttgctgaaatttcaggtgttgtgagc
tttggtaaagagaccaaaggtaaaaatcgcttagtgattacgccagacgatggctctgaa
atttatgaagagttgattccgaaatggcgtaccatgaacgtgtatgaaggcgaacatgtg
aaccgtggtgaaactgtttctgatggtccacaaaacccgcatgacattctacgtctgaaa
ggtgaagtggcgttgaccaattacatcgtgaacgaagttcaggacgtttatcgtctacaa
ggtgtaaaaatcaacgataaacacatcgaagtgattgtgcgtcaaatgttgcgtaaagtt
gaaattactgatggtggtgataccagcttcattaaaggcgaacaagtggattacatccgc
atggttgccgaaaaccaagcagtattggctcagaataagttccctgcgaagtatgaacgt
caattgatgggtattaccaaagcatcgctttcgactgactcgttcatctctgctgcatcg
ttccaggaaaccacgcgtgtgttgactgaagctgctgtaacaggtaaagaagatgagtta
cgtggcttgaaagagaatgtagtcgtgggtcgtttgattccagcgggtacaggtcttgca
tatcacttagagcgtcgtcgtcaagaagcagaagctgctgaacacgaacttgtaaatgac
tttagtgatgttgatcaagcattaagtcaagcatttagcgatgagtttaacggtctgtaa
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integrated database retrieval system
