Acinetobacter sp. TTH0-4: AMQ28_12570
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Entry
AMQ28_12570 CDS
T04075
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03030
DNA replication
att03430
Mismatch repair
att03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMQ28_12570
03430 Mismatch repair
AMQ28_12570
03440 Homologous recombination
AMQ28_12570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
att03032
]
AMQ28_12570
03400 DNA repair and recombination proteins [BR:
att03400
]
AMQ28_12570
Enzymes [BR:
att01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMQ28_12570
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AMQ28_12570
DNA replication proteins [BR:
att03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMQ28_12570
RNase H
AMQ28_12570
DNA repair and recombination proteins [BR:
att03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMQ28_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
ATG29_N
Motif
Other DBs
NCBI-ProteinID:
ALD03101
UniProt:
A0A0M4H0B3
LinkDB
All DBs
Position
complement(2629280..2630680)
Genome browser
AA seq
466 aa
AA seq
DB search
MAQTITLYVDGACRGNPGLGGWGAYIITESEEHKIFGGEPDTTNNRMELTAAIEGVKFCP
TDAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKLLDATCQGREIEWNWIKGHA
GHAGNEMADQLANLGADQTLASMKNLALKADKSSNDKKKDEKDWLLDDPFGFDLMESNEQ
DESEVLDGMESAHIENENFSTETNNKASTLASVAVPESSTTHPHIVITPRTKQVYGPRQL
ILDTETTGFYFQDSDRIVEVGAIEMVNRKLTGSSIHIYINPQKPVGDSENIHGISDAFLK
DKPVYAEIAEVLFEYLKGAEIIAHNATFDMNFLNMEFKRAGFSRLSEVCEVTDTLAMAKN
KHPGQKNSLDALVRRYEIPQRDRTFHGALLDAEILADVYLAMTGGQVSFDMDSLSESEQR
DAQNARENLPILKLPVIYPSEQELEEHEMWVKQFEEKHGTACLFTK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaacaatcactctttatgtcgatggcgcttgtcgggggaatcctggtttaggc
ggttggggtgcttatattattactgaatcggaagagcataaaatttttggtggtgaacct
gataccaccaataatcggatggaactcactgctgcgattgaaggcgttaagttttgccca
accgatgccaaactgattatctggacagattctaattatgttaaacaagggataactgaa
tggattcatggctggaaaaagaaaaactggaaagatgttaaaaaccccgatctttggaaa
ctgttggatgcaacctgccaaggtcgtgaaattgaatggaactggattaaaggacatgca
ggtcatgcaggcaatgaaatggccgatcaactggccaaccttggtgcagaccaaacttta
gcctcaatgaaaaatctcgcattgaaagcagacaaaagttcaaatgataaaaaaaaagat
gaaaaagattggcttctcgatgacccattcggcttcgacttaatggaatctaatgagcag
gatgaaagtgaagttttagatggaatggagtcagcacatattgaaaatgaaaatttctcc
actgaaacgaataataaagccagcaccttagcctctgttgctgtgcctgaatcaagcaca
acacacccacatattgtgatcacccctcgaacaaaacaggtttatggaccacgacaactt
attctagacactgaaaccaccggtttttattttcaggacagcgatcggattgtcgaagtt
ggcgccattgaaatggtgaatcgcaaacttactggtagctcgattcatatttatattaat
ccacaaaaaccagtgggtgactctgaaaatattcatggtatttcagatgcttttttaaaa
gataaacccgtctatgcagaaattgcagaggttctttttgagtatttaaaaggtgccgaa
attattgcgcataatgccaccttcgacatgaacttcttaaacatggaatttaagcgcgct
ggattttcgcgcttatcagaggtctgcgaagtgaccgacaccttggccatggcaaaaaat
aagcatccagggcaaaaaaactcgcttgatgccttagtgcgtcgctatgaaattcctcaa
cgagatcgtaccttccatggtgccttactcgatgctgaaattttagctgatgtttatttg
gccatgacaggtggtcaagtttcattcgatatggatagcttgagtgaaagtgagcaacgt
gacgctcaaaatgcacgtgaaaacctgcctattttaaagcttcctgttatttatccttct
gaacaagaacttgaagaacatgagatgtgggtcaaacaatttgaagaaaaacatggaaca
gcttgtctttttacaaaataa
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