Acinetobacter sp. TTH0-4: AMQ28_13740
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Entry
AMQ28_13740 CDS
T04075
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03030
DNA replication
att03430
Mismatch repair
att03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMQ28_13740
03430 Mismatch repair
AMQ28_13740
03440 Homologous recombination
AMQ28_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
att03032
]
AMQ28_13740
03400 DNA repair and recombination proteins [BR:
att03400
]
AMQ28_13740
Enzymes [BR:
att01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMQ28_13740
DNA replication proteins [BR:
att03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMQ28_13740
DNA repair and recombination proteins [BR:
att03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMQ28_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALD03304
UniProt:
A0A0M4HCL2
LinkDB
All DBs
Position
complement(2855289..2858852)
Genome browser
AA seq
1187 aa
AA seq
DB search
MRFVHLGIHTEFSISESIVRIPDLIKAAVNEEMPALALTDLSNLHAAIKFYTKCLDKGIK
PILGSNIRLNNAEHKATLLAMSNKGWRNLTEIVSRGFIEGQQLDIPCVHKEWILEQNQDL
IVLLGMHSDVGKMLNSSNPQKAEPLLEEWIEKFGNRVYFALTRTDRPDEESFIAGAIQLA
QKHNIGVVAHNDVHFIAQTDFEAHEARVCIADGYVLGDSRRPRYYSPEQYFKTAEEMTAL
FSDIPTAIENTYHIAKRCNVSLRLGFNDLPDYPVPEGHTIDTFFAYVSQQGLEERLNLLY
PIEKRDEDWLEIRQKYDERLTYEISTILNMGFPGYFLIVMDFIQWSKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDIDFCIAGRDRVIDYVARHYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGIDLRGAIDMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVMCDADGTNRVA
QFDKDDVESAGLVKFDFLGLRNLTVIEDAIQNINKRVAEDKKVDIVYIPLDDPKAYAIFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADMLRRAMGKKKPEEMVKQRQIFIE
GAAEKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAYYPSEFMAAVMTS
EMQNTDNVVFLIDDCRNNQLEVFPPSINMSFYQFHASDEKTIVYGLGAIKGVGEAAMQSV
IDSRLQDGPYKDLFDFCHRIDLKKINKRTLEALIRSGALDCLGIDRASLMTQLPEAVQAA
DQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRSE
LKSFIPVKLNELTPTRRGVTTVFAGLVVDIANFPNRMMVTLDDGTSRLEVSANHERFQRF
KDIVQLERVVVIEGEVYEREGYDRPMARLNKAFSLNEIRQKRANSIQIKLNNEHLSKTLS
QDLQKILLPFCNVDMCNHIPLQLQIEYAYASAEVHLGLNWKVAPQDELLAKLRDYFGKDV
IHVEYQVKSKAAKIVQYTKPAQTVPPPANISMDDAMDMYQAEANQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgttcatcttggtatacacacagaattttcaatttcggaatcgatcgtacgt
atacctgatcttattaaagctgctgtgaatgaggaaatgcccgctttagctttgacagat
ttatctaatttacatgctgcaattaaattttataccaaatgtttagataaaggcattaaa
ccgattttaggcagtaatattcgcctcaataatgctgaacataaagcaaccttgcttgcg
atgagcaataaaggctggcgcaacctcactgaaattgtttcgcgcggttttattgaagga
caacaactcgacattccgtgtgttcacaaagaatggattttagaacaaaatcaagactta
attgtgcttttggggatgcacagcgatgttgggaaaatgctgaattcatccaatccgcaa
aaagctgaacctctgttagaagaatggatcgaaaaatttggtaatcgggtttattttgcc
ctcacccgtacagaccgacctgatgaagaaagttttattgcgggtgcgattcaactggct
caaaaacataatattggtgtggtcgcacataatgatgtgcattttattgcacaaactgac
tttgaagcgcatgaagcccgtgtatgcattgcagatggctatgttttaggagatagccgt
cgtccacgttattacagtcctgagcagtattttaaaacagctgaggaaatgacagcatta
ttttcagatattccaacggcgattgaaaatacttatcacattgccaaacgttgtaatgtc
agcttgcgcttaggattcaatgatcttccggattatcctgttcccgaaggtcataccatt
gacaccttctttgcctatgtttcgcaacaaggtttagaagaacgcttaaacttgttgtat
ccaattgaaaaacgggatgaagactggcttgagattcgtcaaaaatacgatgaacgactg
acgtatgaaatcagtaccattttaaatatgggttttccaggctattttttaattgtcatg
gatttcattcaatggtctaaaaataatggggttcctgtcggccctggtcgtggttctggt
gcaggctcactggtggcctatagcttaaaaattaccgatctagatccactgcgttatgac
ttactttttgaacgttttttaaaccctgaacgtgtatcgatgcctgactttgacatcgac
ttctgtattgcaggccgtgaccgcgtgattgattatgtcgcacgtcattatggccgcgag
gctgtttcacaaattgcaacctttggtacgatggcagcaaaaggtgctatccgagatgtt
gctcgtgttcttggaaaatcatacggtctggctgaccgtatttccaaaatgattccgacc
aaacctttaggtatagatttgcgtggtgccattgatatggaaccacagttaaaagatatc
gtcaccaatccatctaacccagataatgatgatgccgctgaaatctgggaaatggcatta
aaactggaaggtattacccgtaacactggtaaacatgccggcggtgtggtgattgcacca
ggtaaaattaccgattattcagctgtgatgtgcgatgctgacgggactaaccgtgtcgca
caattcgataaagatgatgttgaatccgcaggtttggttaaatttgactttttgggtttg
cgtaacctgactgtgattgaagatgccattcaaaatattaataagcgtgttgcagaagac
aaaaaagtggatattgtttatatcccactagatgatccaaaagcctacgccatctttgca
gatgctaatacaactgcagtattccagtttgaatccgtcggcatgaaaaaaatgctgaaa
gaggcacgaccaagtaagtttgaagaaattattgcttttgtatccttgtaccgtccaggg
ccaatggatctgattccagactttattcaccgcatgcatgggggtgaatttgaatattta
cacccacttttagaaggtgttttggaaccgacttacgggattatggtttaccaagaacaa
gtgatgcaagcggcgcaatactgtgcaggttatacgctgggcggtgcagatatgttgcgc
cgcgcaatgggtaaaaagaaacctgaagaaatggtgaaacagcgccaaatctttattgag
ggtgctgccgaaaaagatattgatgaggcgacagccaatcatattttcgattatatggaa
aaatttgcaggctatggttttaacaaatcacatgcagcagcctatgccctcgttgcctac
caaacggcatggttaaaagcttattatccatctgaatttatggctgcggtcatgacttca
gaaatgcaaaacacggacaacgtggtatttttgattgatgattgccgtaataaccagtta
gaagtatttccaccgtcaattaacatgtctttttaccaattccatgccagcgatgaaaaa
accattgtctatggtttaggtgcaattaaaggtgtaggtgaagcagccatgcaatcagtg
attgattcacgattgcaggatgggccatataaagacttattcgacttctgtcaccgaatt
gatttgaaaaagatcaataaacgaaccttagaagcacttattcgctctggtgctttggat
tgtttgggcattgatcgtgcaagtttaatgacacaattaccagaagcagttcaagcagca
gaccaagcacgttctaaccgtgaaacaggcatcatggatttgtttggtgaagttgaagaa
gttcaacgtaaacctgcaaaaccagtaaaaccgtggtcggatgaagttcgtctaaaaggt
gaaaaagatacccttggtttatatttaacagggcatccgattgatgtttatcgctctgaa
ttaaaatcatttattccagttaaactcaatgaattaacacccacccgtcgcggggtaacc
actgtttttgcaggcttggtggttgatattgccaacttccccaaccgtatgatggtcacc
ttagatgatggtacatcacgccttgaagtatctgccaaccatgaacgtttccagcgcttt
aaagatattgttcaacttgagcgtgtggttgtcattgaaggtgaagtttatgagcgtgaa
ggttatgaccgtccaatggcgcgcttaaacaaggcttttagcttaaatgaaattcgtcaa
aaacgtgccaatagcattcaaattaaactcaataatgagcatttgagtaagaccctaagt
caagatttacaaaagatattactgcctttctgtaacgtcgatatgtgtaatcatattccc
ctgcaattacagattgaatatgcttatgcttctgccgaagttcacttgggcttaaactgg
aaagtggcaccgcaagatgaattactggccaaattacgcgattattttggtaaagatgtg
attcatgtcgaatatcaagtgaaatctaaagccgcaaaaatcgtgcagtacactaagccc
gcacaaactgtaccacctcctgccaacatcagtatggatgatgcaatggatatgtatcag
gcagaagccaatcaatattcttaa
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