Agrobacterium fabrum: Atu0085
Help
Entry
Atu0085 CDS
T00070
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atu03016
]
Atu0085 (truB)
Enzymes [BR:
atu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Atu0085 (truB)
Transfer RNA biogenesis [BR:
atu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Atu0085 (truB)
Prokaryotic type
Atu0085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAK85905
UniProt:
Q8UJ53
LinkDB
All DBs
Position
circular:complement(87307..88254)
Genome browser
AA seq
315 aa
AA seq
DB search
MSKPRKQQHRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEQRATDDLEGEVVESSDQRPEEQAIRDILPN
YTGVIMQTPPQFSAIKIAGERAYDLARDGETVEIPAREVEIHRLTLLACPDADTAHFEVE
CGKGTYVRALARDMGRDLGCFGHISELRRTMVAPFGEDMMVPLETLTALEAIEDRDERLE
ALDAFLIDTAEALSSLPRLIINDDQAHRLKMGNPILLRGRDAPANHPEAYATAQGKLVAI
GEIGEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgtaaacagcaacaccgcaaacccaaaggccgtccgatttcgggctgg
ctcatcctcgacaagccgctcgatttcggctccacagaggccgtttccaagatcaaatgg
ctgttcaacgcccagaaggcgggccacgccggtacgcttgatccgctcgcttccggcatg
ctgccgatcgcgctcggtgacgccaccaagaccgtgccctacgtcatggacggccggaag
atctacgaatttaccgtgacctggggcgaacagcgcgcgacggacgatctcgagggtgag
gtggtcgaatcctctgaccagcgcccggaagagcaggcgatccgcgatattctgcccaat
tataccggcgtgatcatgcagaccccgccgcagttttccgccatcaaaatcgctggcgag
cgcgcctatgatctggcgcgtgatggtgagacggtggaaattcctgcacgcgaagtagaa
atccatcgcctgacgctgctggcctgcccggacgccgataccgcgcatttcgaagtggaa
tgtggcaagggcacctacgtgcgggcgctggcccgcgacatgggccgcgatctcgggtgt
ttcggccatatctcggaactgcgccgcaccatggtcgcccccttcggcgaagacatgatg
gtgccccttgaaaccttgacggcgctggaagcgatagaagatcgtgacgaacggctggaa
gcactggatgccttcctgatcgatacggccgaggcgttgtcctcacttccccgcctcatc
atcaacgatgatcaggcgcacaggctgaagatgggcaaccccatcctgctgcgtgggcgc
gatgcgccagccaatcacccggaagcctatgccaccgcgcaaggcaaactggtcgccatc
ggcgagatcggcgaaggcgagttcaggccgaagcgggtttttggctaa
DBGET
integrated database retrieval system
