Agrobacterium fabrum: Atu0096
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Entry
Atu0096 CDS
T00070
Name
(GenBank) DNA polymerase III, tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03030
DNA replication
atu03430
Mismatch repair
atu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atu0096
03430 Mismatch repair
Atu0096
03440 Homologous recombination
Atu0096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atu03032
]
Atu0096
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu0096
Enzymes [BR:
atu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atu0096
DNA replication proteins [BR:
atu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atu0096
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atu0096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
RuvB_N
AAA_19
AAA_24
AAA_18
TsaE
SRP54
DUF815
AAA_assoc_2
SKI
ABC_tran
VapE-like_dom
AAA_2
CbiA
RNA_helicase
AAA_33
vMSA
Rad17
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AAK85916
UniProt:
A9CKQ1
LinkDB
All DBs
Position
circular:complement(99494..101368)
Genome browser
AA seq
624 aa
AA seq
DB search
MSDTVPPKSSESQVGTGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSL
LDQAIAHGGGRVEAEAVRGMLGLADRARIVDLFQHVVKGDVAAALSEFNGQYEAGANPVV
VLNDLADFTHLVTRMKYVPDAAEDPSLSEIERTRGAEFAETIAVTALSRIWQMLLKGIPE
TENASRPAGAAEMVLIRLSHAANLPAPEDAARRLLELSSADGSYTNGGPSGGGNGGGARA
YSSAQTVAAARPAEFAAPRQAGPQPSTMLRAVPDSRPQEMQVAAPKTEERPEPKVPVNSL
QDIADLCQKNRDPVMRAKVRNFVRLVRLEPGRLDMRLGEGAPGSLPGELGVKLKEWTGIH
WIVSLSKEQGEPTLVEAEGNARDARLVDARQDPDVAAILAQFPGAKITDVRIRAAIQDEA
EDITPPSVAESSEGDILPGDDIEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgtaccccccaaatcaagcgaatcccaggtcgggaccggctaccgggta
ctggcgcgcaaatatcgcccgaaggatttctccgatctgatggtcggccaggagccgatg
gttcgaacgctgaccaacgcgtttgagaccggccgcatcgcgcaggcctatatgctgacc
ggcgttcgcggcgtgggcaagacgaccacggcccgcattctcgcccgcgcactgaattac
aagaccgacaccatcgacaaaccgaccatcgaccttcgtattcccggcgaacattgccag
gcgatcatggaaggccggcatgtcgacgtgatcgagatggacgccgcatcccataccggc
atcgacgatattcgtgagatcatcgagcaggtgcgctatcgcccggtctcggcgcgctac
aaggtctatatcatcgacgaagtgcacatgctgtcgacgcaggctttcaacggtcttctg
aagaccctggaagagccgccggagcatgtgaaattcatcttcgcgaccaccgaaatccgc
aaggtgccgattaccgttctgtcgcgctgccagcgtttcgacctgcgccgcatcagcgcc
gccgatcttgtcggcctgttcaccgccattgccggcaaggaaggtttcgaagccgagccg
caggcgctgtcaatgatcgcccgcgcagccgagggttccgcccgtgacggtctttccctg
ctcgaccaggcgattgcccatggcggcggccgtgtggaggccgaagcggtgcgcggcatg
ctcggccttgccgaccgtgcgcgcattgtcgatctcttccagcatgtcgtcaaaggcgat
gtggcggctgccctttcggaattcaacggacaatatgaggctggcgcaaacccggttgtc
gttttgaacgacctcgccgatttcacccatctcgtcacccgcatgaaatacgttcccgac
gcagcggaagacccctcgctttccgaaatcgagcgcacgcgcggcgcggagtttgccgaa
accatcgctgtaacggcgctgtcacgcatctggcaaatgctgctgaagggcattccggaa
acggaaaacgcttcgcgcccggcgggtgccgctgaaatggtgctgatccggctttcgcat
gccgccaatctgccggcaccggaagatgcggcgcggcgcctgctggagctttccagcgct
gacggcagttacaccaatggcggaccttccggcggcggcaacggcggtggcgcgcgcgcc
tattcgtcggcgcagaccgtggcagcggcaagacctgcagaatttgccgccccgaggcag
gccggtccgcagccctccaccatgctgcgcgccgttccagacagccggccgcaggagatg
caggtcgcggccccgaaaaccgaagaacggccggagccgaaggttcccgtcaattcgctg
caggatattgccgatctctgccagaaaaaccgtgatcctgtcatgcgggcgaaggtgcgc
aacttcgtgcggctggttcggctggagcccggccgccttgatatgcgcctcggcgaaggc
gcccccggctcgctgcccggtgagcttggcgtcaagctgaaggaatggaccggtatccac
tggatcgtcagcctcagcaaggaacagggcgagccgaccttggtcgaggcggaaggcaat
gcccgcgatgcccgcctggtcgacgcgcgtcaggatcctgatgttgccgcgatcctggcg
cagtttcccggcgcaaaaatcaccgacgtacgtattcgcgcggcgatacaggatgaggcg
gaggatatcaccccgccatcggttgccgaatcgagcgaaggcgacatccttcccggcgac
gacatcgagttttaa
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