Agrobacterium fabrum: Atu0321
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Entry
Atu0321 CDS
T00070
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Atu0321 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu0321 (mutM)
Enzymes [BR:
atu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Atu0321 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Atu0321 (mutM)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Atu0321 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AAK86137
UniProt:
Q8UIH4
LinkDB
All DBs
Position
circular:314611..315507
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AA seq
298 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL
LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV
CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTLL
DQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAAG
GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaagtcgaaaccgtcagacgaggcctcgcacccgccatggaaggc
gcaagggtccgcaagctccatcttggccgcccggatctgcggtttccgtttccagcggat
ttcgcggggctgatcgaaggaaaaacgatcatctcgcttgggcgcagggcgaaatatctt
ctcatcgagctggaggacgggctgacgatcgtgtcccatctcggcatgtccggctcgttc
cgcatcgaggcggaaaagggagagggcggcgaagcgcccggcgcctttcattatgcccgc
tcgaaagacggcaagcatgaccatgtcgtctttcatctggataaaggagaggagcgcgtc
tgcgtcatctataatgatccgcgccgcttcggcttcatgcatctggtggagcgcaacaag
ctcgacctctatcccgcctttgccgagcttgggcccgaaccgaccggcaatgcgctgagc
gcggattatctggcgagccggttcgagggcaaaagccagccactgaaaagcacgctgctg
gatcagaagatcattgccgggctgggcaatatctatgtctgcgaggcgctttggcgcgcc
catctttctcccttgcgggcggcgggaacgctggtgacgacacgtggcaaaccgaaagcg
cagctcatcgatctgacggagaaaatccgtgatgtgatcgccgatgcgattgccgccggc
ggctcctccctgcgcgaccatatacagacggatggaacgctcggttatttccagcattcc
ttttcggtctacgatcaggaaggccagccttgccggacacccggctgcgggggtacggtt
gaaagggtggtgcaggccggtcgttcgacattctattgcgccgcctgccagaaatag
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