Agrobacterium fabrum: Atu0370
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Entry
Atu0370 CDS
T00070
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00300
Lysine biosynthesis
atu01100
Metabolic pathways
atu01120
Microbial metabolism in diverse environments
atu01230
Biosynthesis of amino acids
Module
atu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Atu0370 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atu01002
]
Atu0370 (dapE)
Enzymes [BR:
atu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Atu0370 (dapE)
Peptidases and inhibitors [BR:
atu01002
]
Metallo peptidases
Family M20
Atu0370 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AAK86187
UniProt:
A9CKC4
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Position
circular:complement(363738..364934)
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AA seq
398 aa
AA seq
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MTTTDPVANLAALIRCPSVTPAEGGALSLLDTLLSPLGFAVERVMATEDGTPDVENLYAR
LGTEGPHLMFAGHTDVVPVGDEAAWSHPPFSADIAGGEMYGRGAVDMKGGIACFVAAIAR
HIGKHGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMI
KIGRRGSLSGRITVQGVQGHAAYPHLADNPIRGLLQLTHALMHPAFDHGTDDFQPSNLEV
TTVDTGNAATNVIPARATAAFNIRFNDSWTAESLRAEIIRRLDAAANEGELRPDRAPVKY
EIVWADRPSHVFLTRNNALISSLSGAIETVTGKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTRIYETFIERWFAHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgccaatctcgccgccctcatccgttgcccgtcggtaacg
cctgcggaaggcggcgcgctttccctgctcgacaccctgctttcaccgcttggttttgcg
gtggagcgcgtgatggcgacagaggacggcacgcctgatgtggagaacctctacgcccgg
ctcggcaccgaaggtccgcatctgatgtttgcgggccatacggatgtcgttcccgtcggc
gacgaggccgcatggagccatccgcccttttcggcagacatcgccggtggcgaaatgtac
ggtcgcggcgcggtggacatgaagggcggcattgcctgtttcgtcgccgccatcgcccgc
catatcggaaaacatggcaaaccgcagggctcggtttccttcctgatcaccggagacgag
gaaggcccgtcgatcaacggcacctccaagcttctggaatgggctgccgcaaagggagag
acgtgggacgcctgtgtcgtcggcgagcctaccaatcccgaccagctgggcgacatgatc
aagatcggccgccggggatcgctctcgggccggatcaccgtccaaggcgttcaaggccac
gccgcctatccacatctcgccgacaaccccattcgtggtctgctgcagctcacccatgcg
ctgatgcatccagccttcgaccacggcacggatgatttccagccatccaatctggaagta
acgaccgtcgacaccggcaatgccgcgaccaacgtcattccggcgcgggcgacggcagcc
ttcaacattcgtttcaacgatagctggacggcagagagcctgcgggcggagatcatccgc
cgcctcgatgcagcggcaaatgagggcgagcttcgccccgaccgggctccggtcaaatac
gagatcgtctgggcggaccgtccgagccatgtcttcttgacccgcaacaatgcgctcatc
tcgtcgctgtcaggcgcgattgaaaccgtaaccggcaaggagccaaagctttcgaccacc
ggcggcacctcggatgcacgcttcatcaaggattattgccctgtcgtggaattcggtctc
gtcgggcagaccatgcacatggtcgatgaacgcgtggcagttgccgatctcgagacgctg
acgcgcatttacgagaccttcatcgaacgctggttcgcccatgccgacggcaagtga
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