Agrobacterium fabrum: Atu0405
Help
Entry
Atu0405 CDS
T00070
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA-ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00061
Fatty acid biosynthesis
atu00071
Fatty acid degradation
atu01100
Metabolic pathways
atu01212
Fatty acid metabolism
atu02024
Quorum sensing
atu04146
Peroxisome
Module
atu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Atu0405 (fadD)
00071 Fatty acid degradation
Atu0405 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Atu0405 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Atu0405 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atu01004
]
Atu0405 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atu04147
]
Atu0405 (fadD)
Enzymes [BR:
atu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Atu0405 (fadD)
Lipid biosynthesis proteins [BR:
atu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Atu0405 (fadD)
Exosome [BR:
atu04147
]
Exosomal proteins
Exosomal proteins of breast milk
Atu0405 (fadD)
Exosomal proteins of breast cancer cells
Atu0405 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AAK86220
UniProt:
A9CKB2
LinkDB
All DBs
Position
circular:complement(400188..401900)
Genome browser
AA seq
570 aa
AA seq
DB search
MSELSLGHPENVSVAKRWLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGK
SLTYRELDADTRAVAAWLQSRGLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLY
TPRELEHQLKDSGAKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGLKGHIVNLVVR
KVKKLVPAHAIPGSISFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHA
NLLANKAQISLWLDAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIAN
PRDIPGFVKELSHYQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAER
WVSVVGCPITEGYGLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEV
GEICIRGPQVMAGYWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGF
NVYPNEVEEVAASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTN
YKRPKIIEFRTDLPKSNVGKILRRELRNLN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgtccctgggacatccggaaaatgtcagcgttgccaagcgctggctggca
tcctatccgccgggcgtgccttcagagattcccgcctcggcaaatgcctccctcattgac
cttctcgaaaagagctgcaagcaatttgccgaccgcaaggccttttccagcatgggaaaa
tccctgacctaccgggaactcgacgctgacacccgtgcggtcgccgcatggctgcaatcc
agaggactggaaaaaggcgaccgggttgcggtgatgatgccgaacatcctgcaaaatccc
gtcgcggtttatgggattctgcgggcgggcatggtcgtggtcaatgtcaacccgctctat
accccgcgcgaactggagcaccagctcaaggactccggcgcgaaagccctgttcgtgctg
gagaacttcgcccatgtggcgcagcaggctgtaccgaaaaccgccgtccggcatgtggtc
gtcgcagcaatgggcgatcttctcggcctcaagggacatatcgtcaatctggtggtgcgc
aaggtcaagaagctggtgcccgcccatgccattcccggctcgatcagcttcaaggccatg
ctgaaggaaggccagggggtttccctgaaaccggtcggccttacggcgcaggacatcgcc
ttcctgcaatataccggtgggacgacgggcgtatccaagggcgccgtcctcacccatgcc
aatctccttgccaacaaggcgcagatcagcctgtggctcgacgctgccttcaacggccgc
aaggaccgccccgaggttctcaacttcatctgcgcgctgccgctctaccatatcttcgca
ctgacggtgaattcactgatgggcattgcgctgggcggccataatctgctgatcgccaat
ccgcgcgacattcccggcttcgtaaaagagctttcgcattaccagccgcatatcttccct
ggcctcaccacgcttttcaacgcgttgatgaacaatgaagagttccgcaaacttgacctg
tcgtcgctcatcttcgtactcggcggtggcatggcagtgcagaggccggtggccgaacgc
tgggtttccgtggtcggctgccctatcaccgaaggttacgggctgtcggaaacctcgccc
gtcgccaccgtcaatcggctcgatgctgcggaattcagcggcaccatcggcctgcccatc
tcctccaccgaaatcgatattcgcgatgaggacggcaacagtctgccaacaggcgaagtc
ggcgagatttgcattcgcgggccgcaggtcatggccggttactggcagaggccggatgaa
accgcgaaggcgataacggcagacggcttcttccgttccggcgatatgggcttcatggac
gaacgcggttacaccaagatcgttgaccgcaagaaggacatgatccttgtttccggattc
aacgtctatccgaacgaggtggaagaagtggccgccagccatcctggtgtcctcgaatgc
gccgcgatcggcgttccggacgaacattccggcgaaaccgtcaagcttttcgtggtcaag
aaggaccagtccctgacggaagcggagctcaaggccttctgtgccaagaacctgacgaat
tacaaacggccgaaaatcatcgagttccgcaccgacctgccgaaatcgaatgtcggcaag
attttgcggcgcgaattgcgcaatctgaactga
DBGET
integrated database retrieval system
