Agrobacterium fabrum: Atu0598
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Entry
Atu0598 CDS
T00070
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00030
Pentose phosphate pathway
atu01100
Metabolic pathways
atu01120
Microbial metabolism in diverse environments
atu01200
Carbon metabolism
Module
atu_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Atu0598 (edd)
Enzymes [BR:
atu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
Atu0598 (edd)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AAK86409
UniProt:
A9CK56
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Position
circular:complement(583195..585015)
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AA seq
606 aa
AA seq
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MSADSRIQAITARIVERSKPYRETYLERLRLQVSKGVHRSVLSCGNLAHGFAVCSPADKD
ILAGDRVPNLGIITAYNDMLSAHQPYETFPAIIRDAAKEAGGIAQVAGAVPAMCDGVTQG
QPGMELSLFSRDAIAMAAGIGLSHNMFDAAVYLGVCDKIVPGLVIAALAFGHLPAVFVPA
GPMTSGLPNDEKSRIRQLYAEGKVGRAELLEAESKSYHGPGTCTFYGTANSNQMLMEIMG
FHMPGSSFINPGTPLRDALTREAANRALAITAQGNEFTPAGEMIDERSVVNGVVGLHATG
GSTNHTMHLIAMARAAGIILTWQDISDLSDIVPLLARVYPNGLADVNHFHAAGGMGFLIK
QLLKQGFVHDDVRTVFGQGLSAYTVDAMLDEKGAVTRQPSPEQSHDPKVLSSIETPFQST
GGLKMLTGNLGKSVIKISAVKPERHIIEAPAIVFHDQQELQDAFKDGKLNRDFIAVVRFQ
GPKANGMPELHRLTPPLGVLQDRGFKVALVTDGRMSGASGKVPAAIHVTPEASDCGPISL
IRDGDIIRLDAISGTLEVLVSAAELAKREPARADLSGNEWGMGRELFAPFRRNAGPADQG
ASVLFH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgattcccgcattcaggccattaccgcccgcatcgtcgaacgttccaagccc
taccgcgagacctatctcgagcggctgcggctgcaggtttcgaagggcgttcaccgttcc
gttctgtcctgcggcaatcttgcgcatggatttgccgtctgttcccccgccgacaaggac
atccttgccggcgaccgggttcccaatctcggcattatcaccgcctataacgacatgctg
tcggcgcaccagccctacgagaccttcccggcgatcatccgtgatgcggcgaaggaagcg
ggcggcatcgcgcaggtagcgggcgcggttcccgccatgtgcgacggcgtgacccagggc
cagcccggcatggagctttcgctgttttcccgcgatgccattgccatggcagccggcata
ggcctgtcgcacaacatgttcgacgccgccgtctatctcggcgtttgtgacaagatcgtg
cccggcctcgtcatcgccgcgctcgcctttggccacctgcccgccgtcttcgttcccgcc
ggtccaatgacatctggcctgccgaatgacgaaaaatcccgcattcgccagctttatgcc
gaaggcaaggtcggccgcgccgagctgctggaggcggaatccaagtcctatcacggcccc
ggcacctgcaccttctacggcaccgccaattcgaaccagatgctgatggagatcatgggt
ttccatatgcccggttcgtccttcatcaatcccggcacaccgctgcgtgatgcactcacc
cgtgaagcagccaaccgcgcgctggcgatcaccgcgcagggcaatgaattcacgccggcg
ggcgagatgatcgacgaaagatccgtcgtcaacggcgtcgtcggcctgcatgcgacgggt
ggctccaccaaccacaccatgcacctgatcgccatggcgcgcgccgccggcatcattctc
acctggcaggatatttccgatctttccgacatcgtgccgctgctcgcccgcgtttatccc
aacgggcttgccgatgtgaaccatttccatgccgccggcggtatgggcttcctcatcaag
cagctgctgaagcagggcttcgtgcatgatgatgtgcgaaccgtcttcggacaggggctt
tcggcctacaccgtcgatgccatgcttgacgagaagggtgcagtcacccgccagccctcc
cccgaacagagccatgacccgaaggttctgtccagcatcgaaacgccgttccagtcgacc
ggcggcctgaagatgctgaccggcaatctcggcaaatcggtgatcaagatttcggccgtc
aagccggaacgccacatcatcgaagcaccggcgatcgttttccatgatcagcaggaactt
caagacgcgttcaaggacggcaagcttaaccgtgacttcattgcggttgtccgcttccag
gggccgaaggccaatggcatgccggaactgcaccgcctgacgccgccgctcggcgtgctg
caggaccgcggcttcaaggtggcgctggtgactgacgggcgtatgtctggcgcatccggc
aaggtgccggctgccatccatgtcacgccggaagcctccgattgcggcccgatctcgctt
atccgcgatggcgacatcatccgtctcgacgccatttccggaacgctggaagtgctggtt
tccgccgccgagctggcaaaacgtgaaccggcgcgtgccgatctttccggtaatgaatgg
ggcatgggccgcgaacttttcgcccccttccgccgcaatgccggcccggccgatcagggc
gccagcgttctcttccattga
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