Agrobacterium fabrum: Atu0860
Help
Entry
Atu0860 CDS
T00070
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu0860
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Atu0860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
FtsK_SpoIIIE
AAA_30
AAA_10
T2SSE
TrwB_AAD_bind
nSTAND3
AAA_25
AAA_16
AAA_19
Hydrolase
DUF5852
AAA_7
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AAK86667
UniProt:
A9CJT6
LinkDB
All DBs
Position
circular:complement(858363..859925)
Genome browser
AA seq
520 aa
AA seq
DB search
MLQDGQLYIGTSRNPDDSLNKGEYLELKFGNRHGLITGATGTGKTVTLQVLAEGFSKAGV
PVFCADIKGDLSGIALEGEAKDWVQKRAEQIGFTDFSYSKSPVIFWDLYGEKGHRVRATI
AEMGPLLLARLMDASEAQEGVLNIAFKIADQGGLPLLDLKDLQSLLNYMGENATALSNQF
GLISKASVGSLQRGLLVLEQQGAANFFGEPALKIADIMRVGADGRGTVSVLAADKLMMNP
RLYATFLLWMLSELFEELPEVGDPEKPRLVFFFDEAHLLFNDAPRVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVRTAADTFRQNPAFSTADT
ITTLGTGEALISTLHDKGAPSIVERTLVRPPSGRVGPLTDSERKSLIDLSPVSGQYDKDI
DRESAFEILNARAQKAAEAEAAKRAEEENAANQSDNASGRWRLPGFGDEEPKQASTTGAR
KTSGYQRETVIEAAMKSAARSVATSVGRAIVRGILGSLKR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggacggacagctctatatcggcaccagccgcaatccggacgacagcctgaac
aagggcgaatatctggaactgaaattcggcaaccgccacggcctcatcaccggcgcgacg
ggaacgggtaagaccgtgaccctgcaggtgctcgccgaaggtttttccaaggcaggcgtg
ccggtcttctgcgccgatatcaagggtgacctttccggtatcgcactggaaggcgaagca
aaagactgggtgcagaaacgcgccgaacagatcggtttcaccgatttttcctatagcaaa
tcgcccgtgatcttctgggatctctacggtgaaaaaggccatcgcgtgcgcgccactatc
gccgaaatgggaccgcttttgctcgcccggctgatggacgcctcggaagcgcaggaaggc
gtgctcaacatcgccttcaagatcgccgatcagggtgggttgccgctgctcgatctgaaa
gacctgcaatcgctcttgaactatatgggcgaaaacgcaacggcgctttccaaccagttc
ggcctgatttccaaggcctcggtcggttcgctgcagcgtgggctactcgttctcgaacag
cagggcgcggccaacttcttcggcgaaccggcgctgaagatcgccgacatcatgcgcgtc
ggcgcggatgggcgcggcacggtttcggttctcgccgccgacaagctgatgatgaacccg
cgcctttacgccaccttcctgctctggatgctgtcggaactgttcgaggaactgcctgaa
gtgggtgacccggaaaaaccgcgcctggtgttcttcttcgatgaagcgcatctgctgttc
aacgatgccccgcgggtgctggtggaacgcgtggaacaggtcgtgcgtcttatccgctcc
aagggcgttggcgtctatttcgtcacgcagaacccgctcgacgtgccggaaaccgttctt
gcccagctcggcaaccgcgtgcagcatgcgctgcgcgcctatacgccgcgcgaacagaag
gcagtgcgcaccgccgccgatacattccgccagaaccccgctttcagcacggccgatacc
atcaccacgctcggcacgggtgaagcgctgatctccaccctgcatgacaagggtgcgcct
tccatcgtcgagcgcacgctcgtgcgcccgccctccggccgcgtcgggccgttgactgat
tcggagcgcaagtcgctgatcgatctcagccccgtctccggccagtatgacaaggatatc
gaccgggaatcggcctttgaaatccttaacgcccgcgcccagaaggcggcggaagcagaa
gccgccaaacgcgccgaggaagaaaatgccgccaaccagtccgacaacgcctcggggcgc
tggcgcctgcccggcttcggtgatgaggagcccaaacaggcctcgaccaccggcgctcgc
aagacgagcggttatcagcgcgaaacggtgatcgaggcagcaatgaaaagcgctgcccgc
tcggttgcgacttcggtcggacgcgccatcgtgcgcgggattttgggaagccttaagcgc
tag
DBGET
integrated database retrieval system
