Agrobacterium fabrum: Atu1029
Help
Entry
Atu1029 CDS
T00070
Symbol
rnpO
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Atu1029 (rnpO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atu03021
]
Atu1029 (rnpO)
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu1029 (rnpO)
Enzymes [BR:
atu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Atu1029 (rnpO)
Transcription machinery [BR:
atu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Atu1029 (rnpO)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Atu1029 (rnpO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AAK86837
UniProt:
Q8UGK8
LinkDB
All DBs
Position
circular:1022139..1022528
Genome browser
AA seq
129 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLASHRARQISQGSSITVDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPVTLAASAADGEDDDQPETVTFDQMSEEELLAGIEGL
VPPEKNDDY
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcacagttgaagattgcattgataaagtagacaaccgtttcgagctggtg
cttctcgcgagccaccgtgcgcgccagatttctcaagggtcctccatcacggttgaccgc
gacaacgacaagaaccctgtcgtggcgctgcgcgaaatcgccgacgagaccctgtctccc
gacgacctgaaggaagacctcatccattcgctgcagaagcatgtggaagtggacgagccc
gagcccgatccggtcacgctcgccgcctccgctgccgatggcgaagacgatgatcagccg
gaaaccgttactttcgaccagatgtcggaagaagaactgctggccggtatcgaaggcctt
gtgccgccggaaaaaaatgacgactattga
DBGET
integrated database retrieval system
