Agrobacterium fabrum: Atu1151
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Entry
Atu1151 CDS
T00070
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atu03016
]
Atu1151 (rnd)
Enzymes [BR:
atu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Atu1151 (rnd)
Transfer RNA biogenesis [BR:
atu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Atu1151 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AAK86955
UniProt:
Q7CZV4
LinkDB
All DBs
Position
circular:complement(1142006..1143172)
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AA seq
388 aa
AA seq
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MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGIDL
TPMFELMANPNVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ
KIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKAQLEREGRSLWLTEEM
NILESRDTYDMHPDDAWLRLKSRLRKPTELAILKFVAAWREREARSRNVPRSRVLKDDGI
FEIAQQQPKDAEALSRLRTIPKGWERSASGTAIIETVNAALALPKEEMPKAPRHSHAPEG
SGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIASEGENATVAALTGWRRELFGDVAL
KLINGEVALRFAGKKVEAVEVEAAASES
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacgactgccgccctcgccgaagcctgcacggaactggcgaaatcggaattc
attaccatcgacaccgaatttttgcgggaaacaaccttctggccggaactgtgcctcgta
cagatggcgagcccgacgctcgaagtactggttgatccgctggccaagggtatcgatctt
acgccgatgttcgaactaatggccaatccaaacgtcgtgaaggttttccacgccgcacgg
caggacatcgaaatcatctatcatctcggcgggctcattccccatccgatcttcgacacg
caggtcgccgccatggtgtgcggtttcggcgattcgatctcctacgaccagctggtccag
aagatcaagaatgtgcagatcgacaaatcctcgcgtttcaccgactggagccgccgtccg
ctcaccgaaaagcagctggattacgcgctggccgacgtaacacatctgcgcgatgtctat
ctctcgctcaaagcgcagctggagcgcgaaggccgctccctgtggctgaccgaagagatg
aacattctggaatcgcgcgacacctatgacatgcatcccgacgatgcgtggctgcggctg
aaatcgcgcctgcgcaagccgacggaactcgccatcctcaaattcgtcgccgcctggcgc
gaacgtgaagcgcggtcgcgcaacgtgccacgctcccgcgtgttgaaggacgatgggatc
ttcgaaatcgcccagcagcagccgaaggacgccgaggcgctgtcgcggcttcgcaccatt
cccaagggctgggaacggtccgcctccggcaccgccatcatcgaaacggtgaatgcggcg
ctggcgctgccgaaagaagagatgccgaaggcaccgcgccacagccacgcaccggaaggt
tccggtgctgccgtggaacttttgaaggttctcctgaagctgacggcagacaagcacggc
gtcgcggccaaggtcatcgccaacagcgacgatctggacaagatcgcgtccgaaggcgaa
aacgcgaccgttgcggcgttgaccggctggcggcgcgagctgttcggcgatgtggcgctg
aaactcatcaatggcgaagtggccttgcgtttcgccggcaagaaggtcgaggccgtggaa
gttgaggcggcagcgagcgagtcgtaa
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