Agrobacterium fabrum: Atu1505
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Entry
Atu1505 CDS
T00070
Symbol
dac
Name
(GenBank) penicillin-binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00550
Peptidoglycan biosynthesis
atu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Atu1505 (dac)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atu01002
]
Atu1505 (dac)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Atu1505 (dac)
Enzymes [BR:
atu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Atu1505 (dac)
Peptidases and inhibitors [BR:
atu01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Atu1505 (dac)
Peptidoglycan biosynthesis and degradation proteins [BR:
atu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Atu1505 (dac)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
SPOR
Beta-lactamase2
RELT
Motif
Other DBs
NCBI-ProteinID:
AAK87296
UniProt:
Q7CZ39
LinkDB
All DBs
Position
circular:1494021..1495520
Genome browser
AA seq
499 aa
AA seq
DB search
MRLKSSAVLKSLSGAHSRKAGATSFVRFVALTLAAAFIAATSVQTAKADPKYAGIVIDAK
SGKVLYGEDPDGLRYPASLTKMMTLYLTFEALNSGRISLDSRVTVSANAAKEPPSKLGVR
AGGSVTVEQAILALVTRSANDMATALGEHLGGSEDRFARMMTAKARALGMTRTTYRNANG
LPNTAQMTTARDQARLGIALRQHFPQYYGYFSTRTFNFGKQVIGNHNRLVGTVKGVDGIK
TGYTRAAGSNLATSAQLDGRSIVAVVLGGRSSAARDATMRKLVATYLPQASRGGNSNLIA
QTRSGPVEEPVTVAAAAPYPSVAVAATDSGLPNAGPVPQTRYEEAPVTAFAGSSSNAAVK
AMEAATWQKGKDPIVRAPVAPDRKLITNSTKVDNIVTASTAASASAAPSVSPRAEAPQGG
WVIQIGASPDENSARGLLQNAQEKGGAALRSAKPFTVAFSKDGSQIYRARFGGFDGQNAA
VNACNVLKKKGVSCWASLQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaagagttcagcagtgttgaaaagtctatctggagcacattcgcgcaaagcg
ggtgcaacgtctttcgtgaggtttgttgcgttgacccttgctgcggcgttcatagccgca
acatccgttcagaccgcaaaggccgacccgaaatatgcgggtatcgtcatcgacgcaaag
tctggcaaggtcctgtatggtgaggatcctgacggtctgcgttatccggcatcgttgacg
aagatgatgacgctttatctgacattcgaggcactcaacagcggacgcatttcgcttgat
tccagggtgactgtttcggccaatgccgcaaaggagccgccgtcgaagctcggcgtgcgc
gccggcggcagcgttaccgtggaacaggctatccttgccctcgttacccggtccgcaaac
gatatggcgaccgcgctcggcgaacatctcggcggctcggaagaccgttttgccagaatg
atgacggcaaaggcccgtgcacttggcatgacccgcacgacctatcgcaatgccaacggc
ctgcccaacacggcgcagatgacgacggcacgcgaccaggcccgtctcggcatcgcgctt
cgccagcattttccgcaatattacggttatttcagcacccgaaccttcaatttcggcaag
caggtgattggcaatcacaatcgcctcgtcggaaccgtgaagggcgtggatggcatcaag
accggttacacccgcgcagccggcagcaatctggcgacatcagcgcagctcgatggccgc
tctatcgtcgccgtcgttctcggcggacgctccagcgctgcccgtgatgccaccatgcgc
aagctcgtcgcaacctatctgccgcaggcatcgcgcggcggcaacagcaacctgatcgca
cagacgcgttctggcccggtcgaagaacccgttaccgtggcggcagccgcgccttatcct
tccgtggcagtcgccgcaaccgattccggcctgcccaacgccggtcccgttccgcagacc
cgttacgaagaagcacccgtcacagcctttgcaggctcttcttccaatgccgccgtcaag
gccatggaagccgccacctggcagaagggcaaagatccgatcgttcgcgcaccggtcgct
cccgatcgtaagctgatcaccaactcgaccaaggtggacaatatcgtcacggcatcgacg
gcagcatccgcatccgccgcaccttccgtctcacccagggcagaggcgccgcagggtggc
tgggtcatccagatcggcgcatcgccggacgaaaactccgcccgtggcctgctgcagaac
gcacaggaaaaaggcggcgcggcactgcgctccgcaaaacccttcacggtcgccttcagc
aaggacggctcccagatctaccgcgcccgtttcggcggctttgacggccagaacgctgcg
gtaaatgcatgtaacgtattgaaaaagaaaggcgtgagctgctgggcgtcactccagtaa
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