Agrobacterium fabrum: Atu1513
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Entry
Atu1513 CDS
T00070
Symbol
uvrA
Name
(GenBank) ABC excinuclease subunit A
KO
K03701
excinuclease ABC subunit A
Organism
atu
Agrobacterium fabrum
Pathway
atu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Atu1513 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu1513 (uvrA)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Atu1513 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Atu1513 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AAK87304
UniProt:
Q8UF86
LinkDB
All DBs
Position
circular:1502391..1505312
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFA
DKPLPPEDTAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPS
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWTD
LSKEAQHAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINKLHIGEVTQMSIRKARDWFEVLPENLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLETLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGTPQ
DVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLQNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV
EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL
LDRRPAGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaagacgatttccatccgtggcgcccgcgagcacaatctcaagggcatc
gatctggatctaccgcgcaacaagctgattgtcatgaccgggctttccggctcgggcaag
tcgtcgcttgccttcgacacgatctatgccgaggggcagcgccgttatgtcgaaagcctt
tcggcctatgcgcgccagttcctggaaatgatgcagaagccggatgtcgaccagattgac
ggtctgtctccggccatttccatcgagcagaagacaacctcgcgcaatccgcgctccacg
gttggcacggtcaccgagatttacgactatatgcgcttgctgttcgcgcgtgtcggggtg
ccctactcacctgctaccggcctgccgatcgaaagccagacagtcagccagatggtcgac
cgtatcctcgctttcgaggaaggtacgcgtctttatatcctcgcgccgatcgtgcgtggc
cgtaaaggcgagtacaagaaggaactggccgagctgatgaagaagggcttccagcgcgtc
aaggtggatggccagttctacgagatcgccgacgttcctgccctcgacaagaaatacaaa
cacgatatcgacgtggtggtcgaccgtgcggtggtgcgcccggatatggccgcgcgcctc
gccgacagtctcgaaacctgcctcaagctcgcagacgggctggctatcgccgaattcgcc
gacaagccgttgccacctgaagacaccgccgccggcggctctgccaacaagtctcttaac
gagacccacgaacgtgtgctgttttcggaaaaattcgcctgccccgtttccggcttcacc
atcccggaaatcgagccgcgtttattctccttcaacaaccccttcggcgcctgccccagc
tgcgatggcctcggctcgcagcagaaggtggatgaaaacctgatcgttccggagccggcg
cgcacgctgcgcgacggcgccatcgccccctgggcaaagtcttcctcgccctattacaac
cagacgctggaagcgctcggcaaggccttcggttttaaactgtccagcaaatggacggat
ctttccaaggaggcgcagcacgccattcttcagggtaccgacgacaagatcgaattcaac
tatcaggatggcgcccgctcctacaagacggtgaagaacttcgaaggcatcgtgcccaat
ctggagcgccgctggaaagagaccgacagcgcctgggcgcgggaggaaatcgagcgttac
atgtcggcagccccctgcccggcctgcgccggttatcgcctgaagccggaagcgctcgcc
gtcaagatcaacaagctgcatatcggcgaagtcacccagatgtcgatccgcaaggcacgc
gactggttcgaggtgctgccggaaaatctcaacgccaagcagaatgaaatcgcagtccgt
atcctcaaggaaatccgcgaacgcctgcggttcctcaacgacgtcgggctggattatctt
agcctgtcacgcaattccggcacgctgtccggcggcgaaagccagcgcatccgtctggcc
tcacaaatcggctcgggcctgacaggcgttctttacgttctggatgagccttcgatcggc
ctgcaccagcgtgacaatgcccgcctgctcgagacactgaaacacctgcgcgatatcggc
aataccgtcatcgttgtcgaacatgacgaggacgccatcctgacggcggattatgtggtc
gatatcggtccggccgccggcattcacggtggtcaggtgatcgcggaaggcacgccgcag
gacgtgatggccaatccgaagtcactgaccggcaaatatctctccggcgaactcggcgtt
gccgtgccagccgaacgccgcaagccgaaaaagggtcgcgagatcaaggtttttggcgcc
cgtggtaacaacctccagaatgtcacggctgccgtgccgctcggcgttttcaccgcggta
accggcgtatcaggtggtggcaagtccaccttcctgatcgagacgctttacaaatcggcg
gcgcgccgggtgatgggcgcgcgcgaaatcccggccgaacatgatcgcatcgacggtttc
gaattcatcgacaaggtgatcgatatcgaccagtcgccgatcggccgcacgccgcgctcc
aatcccgccacctataccggcgccttcacgccgatccgtgactggttcgccggcctgccg
gaagccaaggcgcggggttacgcgccgggccgtttctccttcaacgtcaagggcggccgc
tgtgaggcctgccagggcgacggcgtcatcaagatcgagatgcacttcctgcccgacgtt
tatgtcacctgcgacgtctgccacggcaagcgttataatcgcgagacactggatgttacc
ttcaagggcaaatccatcgccgacgtgctggacatgacggtcgaagaaggcgtggagttc
ttcgccgcggtgccggcggtccgcgacaagctgcaatcgctgttcgatgtcggcctcggt
tacatcaaggtcggccagcaggccaacacgctctcaggcggtgaagcgcagcgcgtcaaa
ctcgccaaggaactgtcgaagcgctcgacgggccgtacgctctatatcctcgacgaaccg
acgacgggcctgcatttccacgacgtcaacaagctactggaaatgctgcatgcgctggtg
gaacagggcaattccgtcgtggtgatcgaacacaatctcgaagtcatcaagacggccgac
tggatcatcgatatcggccccgaaggtggcacgggcggcggcgaagtggtggcaaccggc
acgccggaagacatcgtcaaggtcgagcgctcttataccggccacttcctgaaggaactt
ctcgaccgccggccggccgggaaacgcgaggctgcggagtaa
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