KEGG   Agrobacterium fabrum: Atu1733
Entry
Atu1733           CDS       T00070                                 
Symbol
nrdE
Name
(GenBank) ribonucleoside-diphosphate reductase 2 alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
atu  Agrobacterium fabrum
Pathway
atu00230  Purine metabolism
atu00240  Pyrimidine metabolism
atu01100  Metabolic pathways
atu01232  Nucleotide metabolism
Module
atu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
atu_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:atu00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Atu1733 (nrdE)
   00240 Pyrimidine metabolism
    Atu1733 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atu03400]
    Atu1733 (nrdE)
Enzymes [BR:atu01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Atu1733 (nrdE)
DNA repair and recombination proteins [BR:atu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Atu1733 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AAK87503
UniProt: Q8UEM4
LinkDB
Position
circular:1717324..1721142
AA seq 1272 aa
MRIERRFTKPGQSSYAEIEFRKAVSEIKNPDGSVVFRLADIDVPAQFSQVATDVLAQKYF
RKAGVPKLLKKVEENDVPSFLWRSVADEKALKELPEAERYGSETDARQVFDRLAGTWAYW
GWKGKYFSTEEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG
EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE
EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENY
VKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNLT
ARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDAKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAERSY
EYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPSF
APNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKALELG
EKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPESLR
SLGYSESQIAEIEAYAVGHGNLNQAPAINPSTLKAKGFTDEKIEAVNAALKSAFDIKFVF
NQWTLGADFLKGTLKVSDEQLSDMSFNLLDHLGFAKKDIEAANVHVCGAMTLEGAPFLKN
EHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYM
LSWKLALKANALYRDGSKLSQPLNASLVEDEDDEDFVEELIQQPLAQQAVTITEKIVERV
IERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSSNEGDRAASEPKGSATA
APARGSANVTSFAGSAARKLEPTVAITTSEIVSFKRDYEERAKELAEEIAEEVIDEVVQE
AQQTATALFSDKAAADAASAKAEAKKKENERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGATSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgccgcttcacgaagcccggccaatcgtcttacgcggaaatcgaattc
cgcaaggccgtcagtgaaatcaagaacccggatggttccgtcgtgttccgtctggcggat
atcgacgttcccgcgcagttcagccaggttgcgaccgacgttctggcgcagaaatacttc
cgcaaggccggtgtgccgaagctgctgaagaaggttgaggaaaacgatgttccttccttc
ctctggcgttcggttgccgacgagaaggcattgaaggaactgcccgaagccgaacgttat
ggctccgagaccgatgcgcgccaggttttcgaccgtctggccggcacctgggcctattgg
ggctggaagggcaagtatttctcaaccgaagaagatgcgtccgccttcaaggatgagctt
gcctacatgctcgcaacccagcgcgttgcaccgaacagcccgcaatggttcaacaccggc
ctgcactgggcctatggcatcgatggccccggccaggggcacttctatgtcgaccccttc
acgggcaagctgaccaagtccaaatccgcttacgaacatccgcagccgcatgcctgcttc
atccagtccgtcgaagacgatctggtcaatgaaggcggcatcatggatctgtgggtgcgt
gaagcgcgcctgttcaaatacggttccggcaccggctccaacttctcctatctgcgtggc
gaaggcgaaaagctttccggcggcggcaagtcctccggcctgatgagcttcctcaagatc
ggcgaccgcgcagccggcgccatcaagtccggcggcacgacccgccgtgcggccaagatg
gtcgtcgttgatgccgaccatcccgatatcgaagcctatatcgactggaaggtgaacgag
gagcaaaaggttgccgctctcgtgaccggttccaagatcgttgccaagcacctcaaggcc
atcatgaaggcctgcgtcaattgcgaggccgacaatggtgattgcttcgacccggccaag
aaccctgccctgaagcgcgaaatccgcgctgccaagaaggacatggtgccggaaaactac
gtcaagcgcgtcatccagttcgccgaacagggttacaaggacatccagttcaagacctac
gatacggattgggattccgaagcctatcttacggtttcaggccagaactccaacaactcc
gtatcgctcaaggatgacttcctgcgcgctgtcgaaaatgacggcaactggaacctcacc
gcccgcaaggacggcaaggtcatgaaaacgctgaaggcccgcgatctctgggaaaagatt
tcccacgccgcctgggcatcggccgatccgggcctgcacttcaacaccaccatgaatgac
tggcacacctcgccggccgaaggcccgatccgcgcttccaacccgtgctcggaatatatg
ttccttgatgacacggcctgcaaccttgcctcgctgaacctgctgcagttcaaggatgcc
aagacgaagcgcatcgatatcgccgattacgaacatgccgtgcgcctgtggaccgtcgtt
ctcgaagtctcggtcatgatggcgcagttcccgtcccgccagattgccgaacgttcctac
gaataccgcacgctcggcctcggttacgccaatatcggcggcctgctgatgtcctcgggc
attccctatgacagcgacgaaggccgcgccattgcaggtgcgctgaccgccatcatgacc
ggcgtttcctatgccacctcggctgaaatggccggcgagcttggccccttcccgagcttt
gcgccgaaccgcgacaacatgctgcgcgtcatccgcaaccaccgccgcgccgcccatggc
caatcggaaggttacgagggcctgtcggtgaacccggttgccctcatccatgccgattgc
acggatcaggaccttgtcgcccacgccacggccgcctgggacaaggcgctggaacttggc
gaaaagcacggttaccgcaacgcccagacgaccgtcatcgcgccgacaggcacgatcggc
ctcgtgatggactgcgacacgaccggcatcgagcccgatttcgcgctggtgaagttcaag
aagctcgccggcggcggttacttcaagatcatcaaccgcgccgtgccggaatccctgcgt
tcgctcggttattccgaaagccagatcgccgagatcgaggcctatgccgtcggccatggc
aatctcaaccaggcgccggccatcaatccctcgacgctgaaggccaagggcttcaccgat
gagaagatcgaagccgtcaatgctgcactgaaaagcgccttcgacatcaagttcgtcttc
aaccagtggacgctcggcgctgacttcctcaagggcacgctgaaggtttccgacgagcag
ctctccgacatgagcttcaacctgctcgaccatctcggttttgcgaagaaggacatcgaa
gcggcaaacgttcacgtctgcggcgcgatgacgctggaaggcgcgccgttcctgaagaac
gagcacctggcggtcttcgactgcgccaacccctgcggcaagatcggcaagcgttacctc
tcggtcgaatcgcacatccgcatgatggcggcggcacagccgttcatctccggcgcgatc
tccaagacgatcaacatgccgaacgatgcgacggtggaagattgcggcgccgcctacatg
ctctcctggaagctggcgctgaaggccaacgccctttaccgcgacggttccaagctttcc
cagccgctcaacgcttcgctggtggaagatgaggacgacgaagacttcgttgaagaactg
atccagcagccgcttgcccagcaggccgtgacgatcaccgagaagatcgtcgagcgcgtc
atcgagcgtgtatcgcgcgagcgggaaaagctgccgaaccgccgtcagggttacacccag
aaggcaaccgtcggcggtcacaaggtctatctgcgcaccggcgaattcggtgatggccgc
atcggcgaaatcttcatcgacatgcacaaggaaggcgccgccttccgggcgatgatgaac
aacttcgccatcgccatttcgctcggcctgcaatatggcgtgccgctggaagaatatgtg
gaggccttcaccttcaccaagttcgaacccgccggcatggtgcagggcaacgacgcgatc
aagaacgccacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgccatgatctcgcccatgtcgatacgtccgacttctccaacacggcactcggcaagggt
atccaggaaggcaagaccaacctgctctccaccggctggacacgcggttacaagccgacg
ctggtttccagcaacgaaggtgaccgcgccgcttccgagcccaagggttcggcaacggca
gccccggcacgcggctccgccaacgtcacctcctttgccggctccgccgcccgcaagctg
gaaccaacggttgccatcaccacttctgaaatcgtctccttcaagcgcgattatgaagag
cgtgccaaggagctggcggaagagattgccgaagaggtgatcgacgaggtggttcaggaa
gcccagcagaccgccaccgccctcttctccgacaaggccgccgccgacgcggcatcggcc
aaggcggaagccaagaagaaggaaaacgaacgccgcatgcgctcgatcgcgcagggctat
acgggcaatatgtgctcggaatgccagaacttcacaatggtgcggaatggtacttgtgag
aagtgcgatacttgcggtgcgacgagcggttgctcttga

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