Agrobacterium fabrum: Atu2057
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Entry
Atu2057 CDS
T00070
Symbol
pcrA
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03420
Nucleotide excision repair
atu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Atu2057 (pcrA)
03430 Mismatch repair
Atu2057 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu2057 (pcrA)
Enzymes [BR:
atu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Atu2057 (pcrA)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Atu2057 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Atu2057 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AAK87809
UniProt:
Q7CXZ3
LinkDB
All DBs
Position
circular:2019745..2022219
Genome browser
AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATNNAPSENGGGLGIAARAMAARDQVRPAHDYLSGLNPEQ
REAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYAAYQARLKTLNACDFGD
LLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKDEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNYKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMESFESMRGFLEHVALVMDAEQNAELDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKADPFTNN
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADKPSKF
FVGDRVFHLKFGNGNISAIEGNKLTINFDRAGEKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtttcgacgatatgccgttcttcgatgaagaacccgtggcaccgcgcagg
gcgaccaacaatgccccttcggaaaacggcggcgggcttggcattgccgcccgcgccatg
gcggcgcgcgaccaggtgcggccggcacacgattatctttccggcctcaacccggaacag
cgcgaggccgtggaaacgcttgacggaccggttctcgttctcgccggcgccggcaccggc
aagacccgcgttctgacgacccgcatcgcccatattctcgccaccggccgcgcctatcca
agccagatccttgccgtgaccttcaccaacaaggcggcccgcgagatgaaggaacgtatc
ggcgtcctcgtcggcggcgctgtcgagggcatgccgtggcttggcaccttccactccatc
ggcgtcaagcttctgcgccgccatgccgagctcatcggcctgaaatcggatttcaccatt
ctcgacacggatgatgtggtgcggctgatcaagcagctcattcaggccgaaggtcttgat
gacaagcgctggccggcaaaacagttcgccggcatgatcgacggctggaagaacaagggg
ctgacgccaccggatattcccgagggtgacagccgcgcctttgccaacggcaagggccgc
gaactttacgccgcctatcaggcccggctgaaaacgttgaacgcctgcgatttcggtgat
ctcttgctgcacccgatcagcatcttccgccgccatacggatattctgaaagagtatcac
cagaagttccgttatattctggtggacgaatatcaggacaccaacacggcgcaatatatg
tggctgcggctgcttgcccagcgcgccaaggacgagccgcagaatgtctgctgcgtcggt
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaatatcctgcgcttc
gacaaggattttcccggtgccaaggtcatcaagcttgagcgtaactaccgttccaccgaa
catattctcggcgctgccggccatctgatcgcccacaacgagggccgtctcggcaagacg
ttgtttaccgagcgcagcagtccggacgatgaaaaggtcgtggtgcacgccgcctgggat
tcggaagaagaggcccgcgcggtcggagaggaaatcgagcaactccagcgtaagaactac
aagctgaacgacatggccatcctcgttcgcgcttccttccagatgcgcgaattcgaagac
cgcttcgtgacgcttggcctcaattaccgcgtcatcggcggcccgcgcttttatgagcgc
ctcgaaatccgcgatgccatggcctatttccggctggtctgccaaccggccgacgatctc
gccttcgagcggatcgtcaatacgccaaagcgtggccttggcgatacgacgatccgtaac
ctgcacgactatgcccgcgcccgcgatatcccgatgctggcagccgccgccgacatcatc
gagaccgacgagttgaagccgaaagcgcgcaaggcgctgttcgatgtggtgcaggatttc
cgccgctggcagggcctgctggaaaacaccgaacacaccacgcttgccgaacagattctc
gacgaaagcggctataccgccatgtggcaggccgacaagacggccgaagcaccgggacgg
cttgagaacctgaaggaactcatccgctcgatggaatccttcgaaagcatgcgtggattt
ctggaacacgtcgccctggttatggatgcggaacagaatgccgagctggatgccgtctcc
atcatgacgctgcattccgccaagggtctggaattcgacaccgtcttcctgcccggttgg
gaagaaggcctgtttccccaccagcgggcgctggacgaaggcggtcgctccggtctggag
gaagaacgtcgtctggcttatgtcggcatcacccgcgccaagaagctctgccatatctgg
ttcgtctcgaaccggcgcattcacgggctgtggcaatccaccctgccctcgcgtttcctc
gacgaactgccgcccgcccatgtggatgtcgcggcttccgacagcaattatggcggttat
ggcggacgcggcggttacggccagtcccgtttcgacaaggccgatcccttcaccaacaat
tactccacccccggctggaaacgcgcccagcagaaccgcagcgacgccacccgcgacaat
tggggcacacgctccggccatgcggtggagcgcatcggttacggcgaaagcggcccgcgc
acccgcaccatcgacggcgaactggtggcgaaatccgtggctgacaagccctcgaaattc
ttcgtcggcgaccgtgttttccacctcaaattcggcaatggcaatatttccgcgatcgaa
ggcaataaattgaccatcaacttcgaccgtgccggcgaaaagcgcgtgctggatggattt
gtggaaaaggtttga
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