Agrobacterium fabrum: Atu2178
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Entry
Atu2178 CDS
T00070
Symbol
carB
Name
(GenBank) carbamoylphosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00220
Arginine biosynthesis
atu00240
Pyrimidine metabolism
atu00250
Alanine, aspartate and glutamate metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Atu2178 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Atu2178 (carB)
00220 Arginine biosynthesis
Atu2178 (carB)
Enzymes [BR:
atu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Atu2178 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
CoA_binding_2
YopH_N
Motif
Other DBs
NCBI-ProteinID:
AAK87923
UniProt:
Q8UDE9
LinkDB
All DBs
Position
circular:2150672..2154160
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AA seq
1162 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK
ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE
FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGYEEGEGSKNAI
RAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGLPQD
AENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS
TYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVVRP
SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQTTA
LAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
AAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGINAEK
INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
ALAIKALKAGNLEVKPLQSYFN
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagatatcaagtccatcctcatcatcggcgcgggaccgatcgttatc
ggtcaggcatgtgaatttgactattccggcacgcaggcgtgcaaggcgctgaaggaagag
ggttaccgggtcattctggtcaactccaacccggccaccatcatgaccgatcccggtctt
gccgatgccacttacgtcgagccgatcacaccggaagtcgtcgccaagatcatcgccaag
gagcgcccggatgcgcttctgccgaccatgggcggccagaccgcgctgaacactgcgctt
tctctcaagcgcatgggcgttctcgatcgctacaatgtcgaaatgatcggcgccaagccc
gaagccatcgacatggctgaagaccgcgctttgttccgcgaggcgatggcccgcatcggc
cttgaaacgccgaagtcgatgctcgccaacgccactgaaatcaaggacgccgaccgcaag
acgcacgaagccgcccgcactgaactcaaggcaaaactgtcaggcgcagagctggacaag
gctctcgacaacctcgaaaaccagtggaacctcggcgagacggaccgcaagcagcgctat
atcagccacgccatggccattgccgcgcaggccatcgacgtcgtcggcctgcccgccatt
atccgcccttccttcaccatgggcggcacaggcggcggcatcgcctataaccgctcggaa
ttcttcgaaatcatcggcggcggtctcgacgcatcgcccaccaccgaagtgctgatcgaa
gaatccgttctcggctggaaagaatatgaaatggaagtggtccgcgacaaggcggacaac
tgcatcatcatctgctccatcgaaaacatcgacccgatgggcgtgcacaccggcgacagc
atcaccgttgcccctgctttgacgctgaccgacaaagaataccagatgatgcgcaacgca
tcgattgcggtgttgcgcgagattggcgtcgagaccggcggctccaacgtgcagttcgcc
gtgaacccgaaggatggccgtctggtcgtcatcgaaatgaacccgcgcgtttcccgctcc
tcggctcttgcttccaaggcaaccggcttcccgattgccaaggtcgccgccaagctcgct
atcggctatacgctggacgagctggaaaacgacatcaccggcggcgccacgcctgcgtcc
ttcgagccctccatcgactacgtcgtcaccaagatcccgcgtttcgccttcgagaaattc
ccgggcgcctcgccgatcctcaccaccgccatgaagtcggtcggtgaagtcatggccatc
ggccgtacctttgccgaatcgctgcagaaggcgctgcgtggcatggaaaccggcctcacc
ggtctcgatgaaatcgaaatccccggttacgaggaaggcgaaggttccaagaacgccatc
cgtgccgccatcggcacaccgacgcccgaccgcctgcgcatggtcgcacaggcgatgcgc
atgggaatgagcgaagaagaggtccacgaaaactcgaagatcgatccgtggttcatcgcc
cagcttaaggccatcgtcgacatggaggcccgcattcgcgagcatggcctgccgcaggat
gccgaaaacctgcgcatgctgaaagccatgggcttctccgacgcccgcctcgccagcctg
acgtccaagcgcccgaaggaagtggccgagctgcgtaacagcctgaacgttcgcccggtc
ttcaagcgcatcgacacctgcgctgcagagttcgcttcgcccactgcctacatgtattcg
acctatgagacgcccttcgtcggcgctgcccgctcggaagcgcaggtttccgaccgcaag
aaggtcgtcattctcggcggcggtccgaaccgtatcggccagggtatcgagttcgattat
tgctgctgccacgccgccttcgccctgaaggatgccggcttcgaagccatcatgatcaac
tgcaacccggaaaccgtttcgacagactacgacacctccgaccgcctctatttcgagccg
ctgacggccgaagacgtgatcgagatcatgcgcgccgagcaggaaaagggcgagctggtc
ggtgtcatcgtgcagttcggtggccagacgccgctgaagctcgccgaagcgctggaaaag
aacggcatcccgatccttggcaccgcgcctgacatgatcgaccttgccgaagaccgcgac
cgcttccagaagctgctgatgaagctcgatcttgcccagccgaacaatggcatcgcctat
tcggtcgagcaggctcgcctcgtcgcctcggaaatcggtttcccgctggtcgtgcgtccg
tcctacgtgctgggtggccgcgccatgcagatcatccattcggaaggccaactccagacc
tatctgctcgacaccgttcccggtctcgtaccagaggatatcaagcagcgttacccgaac
gacaagaccggtcagatcaacaccctgctcggcaagaacccgcttctgttcgacagctac
ctgaccaacgccgtcgaagtcgacgtcgatgcgctgtgcgacggcgaaaacgtcttcgtc
tcgggcatcatggagcacatcgaagaggccggcatccattcgggcgactcggcctgctca
ctgccgtcccgttcgctcagcaaggaaaccctcgatgaactggaacgccagacgacggcg
cttgccaaggcactcaaggtcggcggcctgatgaacgtgcaatacgccatcaaggacggc
acgatctacgttctcgaagtcaacccgcgcgcctcgcgtaccgtgccttttgttgccaag
accatcggcgcgccgatcgccaagatcgccgcccgcgtcatggccggcgagaagcttgat
gcggcgattgccgcttatggcgagaagcccgatccgcgcaacctgaagcacatcgccgtc
aaggaagccgtcttccccttcgcacgcttccccggcgtcgacatcctgctcggaccggaa
atgcgctcgaccggcgaagtcatcggcctcgacaccgatttcgcactggccttcgccaag
agccagctcggcgccggcgtcgacctgccgcgctccggcacggtcttcgtttcggtgcgt
gacgaggacaaggaaggcgtgctttccgccatccgcattctcgtggaaagcggcttcaag
gtgctggcaaccggcggcacccagcgtttcctcgccgaacagggcatcaacgccgaaaag
atcaacaaggtgcaggaaggccgtccgcatatcgaggacgccatccgcaaccgtcaggtc
cagctggtcatcaacaccaccgacagcaacaaggcgatctcggatagcaagtcgctacgc
cgcgcaacgctgatgcagaaggtgccttactacacgacgatggccggtgcggaagcagca
gcgcttgccatcaaggcgctgaaggccggcaatctggaagtgaagccgctgcaaagctac
ttcaactaa
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