Agrobacterium fabrum: Atu2455
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Entry
Atu2455 CDS
T00070
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Atu2455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu2455
Enzymes [BR:
atu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Atu2455
DNA repair and recombination proteins [BR:
atu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Atu2455
Prokaryotic type
Atu2455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAK88192
UniProt:
Q8UCM8
LinkDB
All DBs
Position
circular:complement(2426413..2427126)
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AA seq
237 aa
AA seq
DB search
MAEAGVKLEDSWKHVLSGEFASPYMQKLKEFLLAEKTAGKRIFPKGAEYFRALDLTPLDE
VKVVILGQDPYHGLGQAHGLCFSVQPGVRIPPSLVNIYKELQSDLGIRPVKHGFLESWAK
QGVLLLNSVLTVEEARAASHQGQGWEKFTDAVIRAVNDECDHVVFLLWGSYAQKKAAFVD
QRKHLVLRSPHPSPLSAHNGFFGNGHFSKANAFLVSHGRDPIDWQLPDVVEGDKNLL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcaggcgtcaaactcgaagacagctggaagcacgttctctcgggcgaattc
gccagcccctacatgcagaagctgaaagagttcctgcttgccgaaaagaccgccggcaag
cgcatctttccgaagggcgcggaatatttccgcgctctcgacctcacgcctctcgacgag
gtcaaggtcgtcattcttggccaggatccctaccatgggctcggtcaggcacatgggctc
tgcttttcggtgcagcccggggtgcgcattccgccctcgctcgtcaatatctacaaggaa
ttgcagagcgacctcggcattcgcccggtcaagcacggttttctggaaagctgggcaaaa
cagggcgtgttgctgctcaacagcgtgctgacggtggaagaggcgcgggccgcctcgcat
caggggcagggctgggaaaaattcaccgatgcggtcatccgcgccgtgaacgacgaatgt
gaccatgtggtctttctgctctggggttcctatgcccagaagaaggcggccttcgtggac
cagcgcaaacatctcgtgctgcgctcgccacacccgtcacccctttcagcccataacggg
tttttcggcaacggccatttttctaaggccaacgctttcctcgtttcgcatggccgtgat
ccgatcgactggcaattgcctgacgtggtggaaggcgacaaaaaccttctttaa
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