Agrobacterium fabrum: Atu2480
Help
Entry
Atu2480 CDS
T00070
Name
(GenBank) transcriptional regulator, LysR family
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atu03000
]
Atu2480
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
atu01504
]
Atu2480
Transcription factors [BR:
atu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Atu2480
Antimicrobial resistance genes [BR:
atu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Atu2480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
PKS_DE
Motif
Other DBs
NCBI-ProteinID:
AAK88214
UniProt:
A9CHS3
LinkDB
All DBs
Position
circular:complement(2446709..2447608)
Genome browser
AA seq
299 aa
AA seq
DB search
MDQLSAMRVFTRVVETGNFSRAATALNMPKTTVTNMVQALEAHLQTTLLNRTTRRVMLTT
DGALYYERASQILSEIEELDGSMSSAQVQPSGRLRVEMAGVFADLVVIPHLCEFYQRYPQ
IRLDLGVGDRLVDYIAENVDCALRVGVLRDQSLIARKVGELRFETFASPSYIENFGMPRE
PEDLEKEHYSVGYLNATTGQIMPASFDNGVRSVELTPNYVVSVNDSRTYLNAALAGMGIV
QLPVFMVRDALSRGELVPVLSEWRREAMPIYVVYPQTRHVTNKVRVFVDWLAKLVHGLV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctctccgccatgcgggtttttacgcgggtcgtggaaaccggcaatttcagc
cgcgccgccaccgcgctgaacatgcccaaaaccacggttaccaatatggtgcaggcgctc
gaggcgcatttgcagaccacgcttctcaaccgcaccacgcggcgggtgatgctgacgacg
gacggtgctctctattatgagcgggcatcacagattttatcggaaatcgaagagttggac
ggcagtatgtccagcgcgcaagtgcagccatccggccggttgcgggtggaaatggccggt
gtcttcgcggacctggtggttatcccacatctttgcgaattttaccagcgctatccgcaa
atccgtctcgatctcggcgtcggcgaccgtctggtcgactatatcgcggagaatgtcgac
tgtgcgctgcgcgtgggcgtgctgcgcgatcagtcgctgattgcccgtaaagtcggcgag
ctgcggttcgagacattcgcctcgccatcctacatcgaaaatttcggcatgccgcgcgag
ccggaggatctggagaaggaacactattcggtgggttacctcaatgccaccaccggccag
atcatgccggcctccttcgacaatggcgtgcgcagcgtcgagctgaccccgaattacgtc
gtctcggtgaatgacagccgcacctatctcaatgcggcgctggccggcatgggcatcgtg
cagcttcccgtcttcatggtaagggatgcgctttcgcgcggtgaactggtgccggtgctt
tcggagtggcggcgcgaagccatgccgatctatgtggtttatccgcagacccggcatgtg
accaacaaggtgcgcgtttttgtcgactggctggcgaagctggttcacggtctggtgtga
DBGET
integrated database retrieval system