Agrobacterium fabrum: Atu3090
Help
Entry
Atu3090 CDS
T00070
Name
(GenBank) polymerase epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03030
DNA replication
atu03430
Mismatch repair
atu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atu3090
03430 Mismatch repair
Atu3090
03440 Homologous recombination
Atu3090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atu03032
]
Atu3090
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu3090
Enzymes [BR:
atu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atu3090
DNA replication proteins [BR:
atu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atu3090
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atu3090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF2502
Motif
Other DBs
NCBI-ProteinID:
AAK90293
UniProt:
A9CEN2
LinkDB
All DBs
Position
linear:complement(96196..97176)
Genome browser
AA seq
326 aa
AA seq
DB search
MTSQMDFFAPAAARLPQAERGRKSGGREAVPKAGTDDEALATHLEATGNYRVLRRLQPRP
VVDRPRPEFPRQGVILDTETTGLDHRTDEIIEIGVITFTFDDQGAIGDVTGIYGGLRQPG
VAIPEDITRLTGITDEMVAGQSIDMMRLTSLIAHADLIIAHNAGFDRPFCEAFSPIFRDK
AWACSVSEIDWRVRGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQRRSGQNITPF
AELYEASGRSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWVELPGEKLEEELHF
LRTEIYRWDADPTVKHLTAFDRFRAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagatggatttttttgcccccgcggccgcgcggcttcctcaggctgaaagg
ggacgaaagtcgggtggtcgcgaagcggtgccaaaggccggcacggatgatgaagcactt
gccacgcatcttgaagccaccggcaattatcgtgtcctgcgaaggctgcagccgcgtccg
gtcgtcgatcgcccgagaccggaattcccgcgccagggcgtgatcctcgatacggaaacg
acgggccttgatcatcgcaccgacgagatcatcgaaatcggcgtcatcaccttcaccttt
gatgaccagggtgcgatcggcgatgtcaccggcatctatggcgggttgcggcagccgggc
gttgccattcccgaagacataacccgcctgacggggattaccgacgagatggtggccgga
cagtcgatcgacatgatgcgcctgacttcgctcattgcccatgccgatctgatcatcgcc
cataatgccggctttgatcgtccattctgcgaggccttctcgccgattttccgtgacaag
gcctgggcttgttccgtttcggaaattgactggcgggtgcgtggttttgagggcaacaag
ctcggttatctgatcggtcagtcaggctatttccatgacggccatcgtgcggtggatgat
tgtttcgccctgctggaggtgctggaacagaggcgctccggtcagaatatcacgcctttt
gcagagctctacgaagcaagcgggcgttcgcgcgtgcggatttacgcggaaaacagccct
ttcgatatgaaggatcacctgaagaagcggggttatcgctggtccgatggttccgatggc
cggccgaaatcctggtgggtggaactgccgggagagaagctcgaagaggaactgcatttc
ctgcgcaccgaaatctatcgctgggatgccgatccgaccgtcaaacatctcaccgccttc
gaccgcttcagggcgggatag
DBGET
integrated database retrieval system
