Agrobacterium fabrum: Atu4104
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Entry
Atu4104 CDS
T00070
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
atu
Agrobacterium fabrum
Pathway
atu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Atu4104 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
atu03011
]
Atu4104 (rpsA)
Ribosome [BR:
atu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Atu4104 (rpsA)
Bacteria
Atu4104 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF5446
DUF7804
Motif
Other DBs
NCBI-ProteinID:
AAK89327
UniProt:
Q7CU26
LinkDB
All DBs
Position
linear:1222756..1224456
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AA seq
566 aa
AA seq
DB search
MSVSTPTRDDFAALLEESFASNDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFG
AKSKDGTLKVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPW
QAFAFSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDV
VKAVVLDVDVEKERISLGIKQLGKDAVGEAATSGDLRKNAVVSCEVIAVNDGGVEVKLVN
HEDITSFIRRNDLARDRDDQRPERFAVGQVFDARVVNFSKKDRKVMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRGE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatctacccccacgcgcgacgatttcgcagcgcttctcgaagaatcctttgcc
tctaacgatcttgccgaaggctatgttgccaagggtatcgtcacggcaatcgagaaggac
gtcgcgatcgttgacgtcggtctgaaggtcgaaggtcgcgttccgctcaaggaattcggc
gcgaagtccaaagacggcacgctgaaggtcggcgacgaagtcgaagtttacgtcgagcgc
atcgaaaatgctctgggcgaagccgttctgtcgcgcgagaaggctcgccgcgaagaaagc
tgggtcaagctcgaagccaagttcgaagctggcgagcgcgtcgaaggcgttatcttcaac
caggtcaagggtggtttcaccgtcgatctggacggcgctgttgccttccttccgcgttcg
caggtcgacatccgtccgatccgcgacgttaccccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgttgtttctcgccgtacggttctc
gaagagtcgcgtgccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgacggcgtcgtcaagaacatcaccgactacggtgcgttcgttgacctcggcggcatc
gacggcctgctgcacgttaccgacatggcatggcgccgcgtcaaccatccttcggaaatc
ctcaacattggccagcaggtcaaggttcagatcatccgcatcaaccaggaaacccaccgt
atctcgctcggcatgaagcagctcgagtccgatccgtgggatggcatctccgccaagtac
ccggttggcaagaagatctccggtacggtcacgaacatcaccgactacggcgcattcgtt
gagctggagccgggcatcgaaggcctgatccacatttcagaaatgtcctggaccaagaag
aacgtccatcccggcaagatcctgtccacgagccaggaagtcgacgttgtcgttctcgaa
gtcgatccgtccaagcgccgtatctcgctcggcctcaagcagacgctggaaaacccgtgg
caggcatttgccttcagccatccggccggcactgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcattggcctcgaaggcgatgttgacggcatggttcacctgtcg
gatctcgactggaaccgtccgggcgaacaggtcatcgaagagttcaacaagggtgacgtg
gtcaaggctgtcgttctcgatgttgacgtcgagaaggaacgcatctcgctcggcatcaag
cagctcggcaaggatgctgtcggtgaagccgcaacctccggcgacctgcgcaagaacgca
gtcgtttcgtgcgaagtcatcgccgttaacgacggtggcgtggaagtgaagctcgtcaac
cacgaggacatcacctccttcatccgccgcaacgacctcgcacgcgatcgtgacgatcag
cgtccggagcgtttcgcagttggccaggttttcgacgcccgcgtcgtcaacttctcgaag
aaggaccgcaaggtcatgctttcgatcaaggctctggaaatcgctgaagagaaggaagcc
gtcgcacagttcggttcgtccgactcgggcgcttcgctcggcgacatcctcggcgcggct
ctgaagaaccgcggcgaataa
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