Agrobacterium fabrum: Atu4223
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Entry
Atu4223 CDS
T00070
Symbol
soxD
Name
(GenBank) sarcosine oxidase delta subunit
KO
K22085
methylglutamate dehydrogenase subunit B [EC:
1.5.99.5
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00680
Methane metabolism
atu01100
Metabolic pathways
atu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Atu4223 (soxD)
Enzymes [BR:
atu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
Atu4223 (soxD)
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Gene cluster
GFIT
Motif
Pfam:
SoxD
zf-HYPF
Motif
Other DBs
NCBI-ProteinID:
AAK89216
UniProt:
A9CG89
LinkDB
All DBs
Position
linear:complement(1348611..1348886)
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AA seq
91 aa
AA seq
DB search
MASLVSCPHCGPRPKEEFTVKGAALQRPAADAGSDEWFDYVYLRDNPRGSYEEYWHHTSG
CRRWLVVARDTVTHEISACRDAAEKTKVTSA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctcgtatcctgcccgcattgcgggccaagacccaaggaagaattcaccgtc
aagggtgcagccctccaaaggcccgccgccgatgctggctccgatgaatggttcgactat
gtctatctgcgcgacaatccgcgcggctcctatgaggaatattggcaccacacctccggc
tgccgccgctggctggtcgtggcccgcgataccgtcacccacgaaatatccgcctgccgc
gacgctgccgaaaagacgaaagtgacaagcgcatga
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