Agrobacterium fabrum: Atu4232
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Entry
Atu4232 CDS
T00070
Name
(GenBank) transcriptional regulator, GntR family
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atu03000
]
Atu4232
Transcription factors [BR:
atu03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Atu4232
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_10
TrmB
HTH_5
HTH_Crp_2
HTH_11
HTH_IclR
HTH_23
HTH_28
HTH_27
Rrf2
GMT-wHTH
EAP30
HTH_41
HTH_29
HTH_CodY
MarR
HTH_24
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AAK89207
UniProt:
Q7CUD9
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All DBs
Position
linear:1357532..1358227
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AA seq
231 aa
AA seq
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MTGALQGTAIRVERPTKTLRELALDKVRDAIVNGYFRPGDRLVERELCAQLGVSRTIVRE
VLRHLESEGLVANLPNKGPMVALLDLDEAKQIYEIRGALEGMAARLCAERRDPAIVEALE
VSLRRIRESYVAKDMPGVLTHTSSFYQTLFSKIDRHVAWGVVNLLTVRINHLRSMTIKTK
SRDTDGPAQMEKIVDAIRKGDGDAAYKAALDHVTSACAIAEAVLTAQKTAD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgctttgcagggaactgccattcgcgttgagcgtccgacgaagacgctgagg
gaactcgcgctcgacaaggtgcgggatgcgatcgtgaatggttatttccgcccgggcgac
cgtctggttgagcgcgaactttgcgcccaactcggtgtttcccgcaccatcgtgcgagaa
gtcctgcggcatctggaatccgaagggctggtggcgaacctgccgaataaaggcccgatg
gttgcgctgctcgatctcgacgaggccaagcagatttatgaaatccgtggtgcgctggaa
ggaatggcggcgcgtctttgcgccgaacgccgcgatcctgccattgtcgaggccctggag
gtttcgctcaggcgcatccgcgaaagttatgtcgccaaggatatgccgggcgtgctcacg
catacctcgtccttctaccagacgctgttcagcaagatcgaccggcatgtcgcctggggc
gtcgtcaatttgctgacggtgcggatcaaccatctgcgctccatgacgatcaagacgaaa
agccgcgataccgacggtccggcgcagatggagaagatcgtcgatgccatccgcaagggg
gacggtgacgccgcttacaaagccgcgctcgatcatgtgaccagcgcctgtgccattgcc
gaagccgtcctgacggcgcaaaaaaccgccgactga
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