Agrobacterium fabrum: Atu4412
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Entry
Atu4412 CDS
T00070
Symbol
rzcA
Name
(GenBank) rhizobiocin/RTX toxin
Organism
atu
Agrobacterium fabrum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Big_9
Cadherin_5
Cadherin_4
K319L-like_PKD
Metallophos
He_PIG
HCBP_related
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
AAK89027
UniProt:
Q7CUW1
LinkDB
All DBs
Position
linear:1547273..1553086
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AA seq
1937 aa
AA seq
DB search
MATSYSLVYDVYFPSNGSTGWMPFLQTDVTNVSDGDIFGKASGDSYGLGISSNYRGTAKL
DAWNRIGLTIDKNTDGTLSMNKYVNGEFVATQQIASSSASRFAIDLQKGFLIFSDEDGET
SPGYLSNFLFLQKSLSKDEMSLLGGPKASGIVPDSMKQAAEQIGAIETRFSNGSAAPVMG
TGTITAKGTSLQFTTPEGAGILGIGETAAVAPSTVAKIAPIKDMMVTPDAANATIDLAKY
FSGEKLTFTVQNSENKVVAATLDAGGKLTLDFAELGHSDVRVTATDDAGKSVTDDFRVRV
AGPNAYTIAVFPDTQDYTSNDGIKHLFGDMTQWLVDNRQNHSIVFMSHVGDITQNNKSSE
WDIAEAALRKLDGKLPYALLPGNHDQGTYGNAANHSSDQLDSRFSAEKQAATNAGVFGGA
YDQEKTAARNTYSTFTAPDGTKWLSISLEFGPRDDVIRWAGDVIEKFPDHRVMLATHSLT
SYATRQDNLALPLYDEGAGYDYGMRTDQRGANDGEYVARALLARYPNIVMTFSGHIFGDG
AETDITYNQYGEPVFQFLVNYQNGVSREITGNGIESRGNNGGNGAIRLITIDPDNNRITT
ETYFTAFDDYLDGYRTKPELDRDGLTGYYRGHQEVFENIYVGQGKARAMADAGDDIVASA
ASGASVANVALSAAKSLRSQDIRSFVWTDSNGDVVAEGKEAIADLSLGKHKLTLTTTDVN
GVKTSDTLDVLVRGDRTLLVDNFNDGKADGWATDFGATDGNTGNFLLKGTVFSRSTTGDG
LDAPEAALFDQSDATGNKLVYIGAQSSGWSNYVFEATLTQLDNDAIGVYFYYSDAKNYYR
FTMDGEANRRQLVKVSNGVETLLASVNEGSPYNMDIPLTVAIVDGAINVFLGDKNVFGGP
VVDVTSPLSGGTVGLYSSGQRASVFDDIVVTKAATTAKAGIDQRVYDFDGDGKVSVRLDA
SSSFSAGQLRDFVWTDLDGNVVAIGKKVDADLNVGVNKLLLMVSDAQGSVSTDRIDVTVV
DKTKILVAENFSTAEAMARFKIVDEGEFGGIGADGKSSEWLISDGKLLQTTGLMSRELTW
NGATNSDKYKRGWSPMGDGVNVLRLGTYALFNDPAAQAWTDYAIEANFQTPDKDGLGFLF
RYKDSKNYYKLELDADGILDRNPGNGAGSIFNLVRMKNGIEEILAQVPGKYEPGQEMKLR
VEVIGDKITAFLNEEALFAYPIGDRGLAAGTFGLYSWGNAGLTFDNLTVVDLKSGLEVNR
IVGTNGADVLVGTAAAETMFGLEGNDELQGFGGDDRLDGGAGDDALAGGTGNDALSGGAG
NDELWGDDGDDMIAGGLGDDFIEGGRGNDLLIGGDGSDRYRYGRGDGSDVIVETASASGS
VDRLSLYDIDRSEAVLRKYGQSVVIELADGETLTLSNQLADGGIERLSFADGVVLNRGDI
VKGLVNRGPVAADDGLAAVNEDAPSFVISFATLLGNDRDADLDGLTVTGVSAPVGGTAVL
EETGIRFTLSADFNGDAAFRYSIADGRGGVSEATASFNVKPVNDAPVFSSSANVETEEDT
AVSGRIVATDADGDTLSFALKADAVNGIARINAETGAWTYTPNENVNGTGSFTVVVSDGK
GAATESTVTVTIKAVNDAPVAVADLIAIGEKDKGVFDLVANDKDIEGDRLALVGVAVTAV
AGLSLTNEQAAAAFSLVDGKLVADPSSAFAKLEDDQQATVTLTYTVRDANGGESTGTTTV
TVDGYTEYNIVEGSDGADVLIGTSRKDMIEGGAGDDRLSAGSGNDMVDAGSGNDRVIAGE
GDDVVDGGPGNDVLMGGAGNDVLYGGDGNDEISGGSGNDTLSGGAGNDVLTGGSGADTFV
FATGSGRDVVTDFQAGADGKDVVELSKEVFADYRALIASGSFTDGEDGAQIAFKDGSTIT
FDGVKTEQFVIDDFRFA
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcctacagccttgtttacgatgtctatttcccgtcgaacggctccaccggc
tggatgccgttcctgcagacggatgttacgaacgtcagcgacggtgatatttttggcaag
gcgagcggtgacagctacggcctcggtatcagcagcaattatcgcggcacggcgaaactg
gatgcctggaaccggatcggtctgacgatcgataaaaacaccgacggtacgctgtcgatg
aacaaatacgtcaatggcgaatttgttgcgacccagcaaatcgcgtcgtccagtgccagc
cgtttcgcgatcgatctgcagaagggtttcctaatcttttccgatgaggatggcgaaacg
tctcccggttatctcagcaattttctcttcctgcagaaatcgttgtcgaaggacgagatg
tccttgctcggcggacccaaggcgtcaggcatcgtgccggattcgatgaagcaggcggcc
gagcagatcggtgccatcgagacccgtttttcgaatggttccgccgctcccgtgatggga
accgggaccatcaccgcgaagggaacctccttgcagtttacgacgccggagggtgcgggc
atcctcggtattggcgaaactgcggccgttgctccctcaacggtggcaaaaatcgccccg
atcaaggacatgatggtcacgcccgacgccgccaatgcgacgattgatctcgccaaatac
ttttccggtgaaaagctcaccttcaccgtccagaacagcgaaaacaaggtggttgccgcg
acacttgatgccggcggcaaactgacgctcgattttgcggagctagggcattctgatgtc
cgtgtgactgcgaccgacgacgccggcaaaagcgtgaccgacgattttcgcgtgcgggtg
gccggccccaacgcctataccatcgccgtttttcccgacacgcaggactacacctcgaac
gacggtatcaagcatcttttcggtgacatgacgcagtggctggtcgacaatcgtcaaaac
cattcgatcgtcttcatgagccacgtcggcgacataacccagaacaacaagtcttccgaa
tgggatatcgccgaagctgcgctgcgcaagctggatggcaagcttccctacgcattgctt
cccggcaatcacgaccaggggacatacggcaacgccgcaaatcattcctccgatcaactg
gacagccgcttttcggcggaaaagcaggcggcaaccaatgccggcgttttcggtggcgct
tacgatcaggaaaagacagctgcccgcaacacctatagtacctttaccgcgcctgatggc
acgaaatggctgtcgatctcgctcgaattcggcccgcgcgacgacgtgatccgctgggcg
ggtgacgtcatcgagaagttccccgatcatcgtgtcatgcttgccacccattcgctgaca
agctacgcaacacgtcaggacaatctggccctgccgctttatgacgagggtgcgggctac
gattacggcatgcgcacagaccagcgcggtgcaaatgacggcgaatatgttgcccgtgcc
cttcttgcacgttatccgaacatcgtcatgaccttctccggccacattttcggcgacggg
gcggaaacggacatcacctataaccagtacggcgaaccggtcttccagtttctggtcaac
tatcagaacggtgtctcgcgtgaaatcaccggcaacggcatagagtcgcgcggcaataac
ggcggcaatggtgcaatccgccttatcaccatcgatccggacaataatcgcataacgacg
gaaacctatttcacggcttttgacgattacctcgatggttatcgaacgaagcctgaactc
gatcgcgacggcctgaccggttattatcgcggccatcaggaagtgttcgagaacatctat
gtcgggcaggggaaggcccgcgccatggccgatgccggtgacgatatcgtcgccagcgcc
gcaagcggtgcgtcagtcgccaatgtcgctctttccgcggcgaaatcgctgcgttcgcag
gacatccggagtttcgtctggacagacagcaatggtgatgtcgtcgccgaaggcaaggaa
gcgatcgccgatctttcgcttggcaaacacaagctgaccctgaccacaacggacgtcaac
ggtgtcaaaaccagcgatacactcgatgtcctggtgcgcggtgaccgcacgctgctcgtt
gataatttcaatgacggcaaggcggatggctgggcgaccgactttggcgcaaccgacggc
aataccggaaacttcctgctgaagggcacggtgttttcgcgctcgacgacgggcgacggt
ctcgatgcgcctgaagctgcccttttcgaccagagcgatgcaacgggcaacaagctggta
tacatcggtgctcaatcatccggctggagcaattacgttttcgaggcgacgctgacccaa
ctcgataacgacgcgatcggtgtctatttctactatagcgatgcgaagaattattaccgc
tttacgatggatggcgaggccaaccgtcgtcaactggtcaaggtttcgaatggtgtcgag
acgcttcttgcctccgttaatgaaggttcgccttacaatatggatattccgttgaccgtt
gccatcgttgatggcgcgatcaatgttttcctgggagacaagaacgttttcggcgggcct
gtggtggatgtgacgtctccactttccggcggtacggtcggtctgtattcaagcggccaa
cgcgcatcggttttcgatgatattgtcgtaacgaaggccgccaccactgcgaaagcgggc
atcgatcagcgtgtctatgatttcgacggtgatggcaaggtttccgtcaggctggacgct
tcaagttcgttttcagcagggcaactgcgcgatttcgtctggactgacctcgacggcaac
gtcgttgcgataggcaaaaaagtggatgccgatctcaatgtcggcgtcaacaagctgctt
ctcatggtcagcgacgctcaaggctccgtttcgacggaccggatcgacgtaaccgtggtg
gacaagacgaaaatcctcgtggccgagaacttctcaaccgctgaagcgatggcgcggttc
aagatcgttgatgaaggcgaattcggcggcatcggtgcggacggcaagtcgtcggaatgg
ctgatttccgatggcaagcttctccagacgacggggctcatgagccgcgaattgacgtgg
aacggtgcaaccaattccgacaagtacaagcgcggatggagcccgatgggcgacggcgtc
aatgtgctgcgtctcggaacctatgccctgttcaacgatccggcggcgcaggcgtggacg
gattatgccatcgaggcgaatttccagacgcctgacaaggatggtctcggcttcctgttc
cgttacaaggacagcaagaactactacaagctcgaactcgacgctgacggtattcttgat
cgtaatcccggcaacggtgccggcagtatatttaatcttgtgcgcatgaaaaacgggatc
gaagagatcctggcgcaggtgccgggcaaatatgaaccggggcaggagatgaaactgcgc
gtcgaggtgatcggcgacaagatcacagccttcctcaatgaagaggcgctgtttgcctat
ccgatcggtgatcgtgggctcgctgccggtactttcggcctctattcctggggtaatgcc
ggcctgaccttcgacaatttgaccgtggtcgatctcaaatccggacttgaagtgaaccgt
atcgtcgggaccaatggcgctgacgtgctcgtgggaacagcggctgcagaaacgatgttc
ggccttgaaggcaatgacgaactgcagggtttcggcggcgatgaccggctggatggcggc
gcgggcgatgatgcgctggcgggcggtacgggcaatgacgccctttccggcggcgccggc
aatgacgagttgtggggcgatgacggcgacgacatgatcgccggcggtctcggcgacgat
ttcatcgaaggcggccgtggcaatgacctgctaattggcggtgatgggtcggaccgttat
cgttatggacgcggagacgggtccgacgtcatcgtcgagacggcctcggcatccggttcg
gttgaccgcctgtctctctatgacatcgaccgcagcgaagcggttctgcgcaaatacggc
cagtccgtggtcatcgaactggccgatggtgagacgctgacgctgagcaaccagcttgcc
gatggcggcatcgagaggctgtcctttgccgatggtgtggtcctgaaccggggcgatatc
gtcaagggtctcgtcaatcgtggcccggttgcggcggatgacgggcttgcggcggtaaac
gaagacgcgccgtccttcgtcatctccttcgccacgctgcttggcaatgaccgcgacgct
gatctcgatggcctgacggtcaccggcgtctcggccccggtcggcggcacggcggtgctg
gaggaaaccggcatccgcttcacgctctctgccgattttaatggcgacgcggctttccgt
tacagtattgccgatggtcgcggcggggtgagcgaagcgacggcctccttcaacgtcaag
ccggttaatgacgcgccggtcttctcttcgtcggccaatgtcgaaacggaggaagacacg
gccgtcagcggcaggatcgttgcgaccgatgccgacggtgacacgctctccttcgcgctg
aaggccgacgccgtgaacggcatcgcccggatcaacgcggaaaccggcgcgtggacctac
acgcccaatgaaaatgtcaacggaaccggcagtttcaccgtcgtcgtctccgacggtaag
ggcgccgcgaccgagagtactgttaccgtcaccatcaaggcggtcaacgacgctccggtc
gcggttgccgacttgattgccatcggagaaaaggacaagggcgtctttgatctcgtggcc
aatgacaaggatattgagggtgaccgtctggcgctggtcggtgttgcggtgacggccgtt
gccggtctctccctgacgaacgagcaggcggcggcagccttctcgctagtcgacggcaag
ctggtggccgatccttcctccgccttcgcaaagctggaagacgaccagcaggcgactgtc
acgctcacctataccgtgcgcgatgccaatggtggtgaatcgacgggcacgaccaccgtc
acggtcgatggttataccgaatacaacatcgtcgaaggcagcgatggcgccgatgtgctg
atcgggacaagccgcaaggacatgatcgaaggcggcgctggtgacgacaggctgtcggct
ggctccggcaacgacatggtggatgccggctccggcaacgaccgtgtgatcgccggtgag
ggcgatgacgtggttgacggcggccccggcaatgacgtgctgatgggcggtgccggcaat
gacgtgctttatggcggcgacggcaacgacgagatcagcggcggttcgggtaacgacacg
ctgagcggcggggcaggcaacgacgtcctgaccggcggcagcggtgcggataccttcgtc
ttcgctaccggcagcggccgggatgtggtgacggacttccaggccggcgctgacggcaag
gatgtcgtcgaactctcgaaggaggtcttcgctgattaccgggcgctcatcgcctccggc
tccttcacggacggtgaggatggtgcgcagatcgccttcaaggatggatcgaccatcacc
tttgacggcgtgaagaccgagcagttcgtcatcgacgacttccgcttcgcctga
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