Agrobacterium fabrum: Atu4418
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Entry
Atu4418 CDS
T00070
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00071
Fatty acid degradation
atu00310
Lysine degradation
atu00362
Benzoate degradation
atu00380
Tryptophan metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
Atu4418 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
Atu4418 (gcdH)
00380 Tryptophan metabolism
Atu4418 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Atu4418 (gcdH)
Enzymes [BR:
atu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
Atu4418 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AAK89022
UniProt:
A9CGL8
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Position
linear:complement(1559543..1560730)
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AA seq
395 aa
AA seq
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MSERAAFHWQDPFLLEDQLTDDERMIRDSAEAFGKSELLPRISEAYLSETTEPELFRLMG
RTGLLGVTLPEEYGAANASYVAYGLVAREVERIDSGYRSMMSVQSSLVIHPIFAYGSDEQ
KKKYLPGLVSGELIGCFGLTEPDAGSDPGGMKTRAEKIEGGYRLRGSKMWISNAPIADVF
VVWAKSEAHDNEIRGFVLEKGMKGLSAPKIGGKLSLRASITGEIVMDGVEVGEDALLPNV
SGLKGPFGCLNRARYGISWGVMGAAEDCWFRSRQYGLDRKQFGKPLAGTQLYQKKLADMQ
TEIALGLQASLRVGRLMDEHKMAPEMISIVKRNNCGKALDIARQARDMHGGNGIQIEYHV
MRHAQNLETVNTYEGTHDVHALILGRAQTGIQAFF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacgcgcagcatttcattggcaggacccttttctgctcgaagaccaactgacc
gacgacgagcgaatgatccgcgacagcgccgaggccttcggcaaatccgaactgctgccg
cgcatctcggaagcctatctttccgaaaccaccgaaccggaactcttccgtctgatggga
cgcaccggcctgctcggcgtcaccctgccggaagaatacggcgcagccaatgccagctat
gtggcttacggcctcgtcgcccgcgaggtggagcggatcgacagtggttaccgctcgatg
atgagcgtgcagtcctcgctcgtcattcacccgatcttcgcttacggctcggacgaacag
aagaagaaatacctgccgggcctcgtttccggtgaactgatcggctgtttcggcctcacc
gagccggatgccggctccgatcccggcggcatgaagacccgcgccgaaaagatcgagggc
ggttatcgcctgcgcggttcgaaaatgtggatttccaacgcgccgatcgccgatgttttc
gtcgtctgggcgaaatcggaagcgcatgacaatgagatccgtggtttcgtgctggaaaag
ggcatgaaaggtctttccgcccccaagatcggcggcaagctttcgctgcgcgcctccatt
acaggcgaaatcgtcatggatggcgtggaagtgggcgaagatgcattgcttccgaatgtt
tccggactgaaaggcccgttcggctgccttaaccgcgcccgttacggcatttcctggggc
gtgatgggggctgcggaagattgctggttccgttcccgccaatatggcctcgatcgcaaa
cagttcggcaagccgctcgccggcacgcagctttaccagaagaagctcgccgacatgcag
accgaaatcgcgctcggccttcaggcatcgctgcgcgtcggccggctgatggacgaacat
aagatggcgccggaaatgatctccatcgtcaaacgcaacaattgcggcaaggcgctggat
atcgcccgccaggcccgcgacatgcatggcggcaatggcattcagatcgaatatcacgtc
atgcgccatgcccagaatcttgaaacggtgaatacctatgagggcacgcatgacgtgcac
gcgctgatcctcggccgggcgcagacgggcattcaggcgtttttctga
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